Phenylobacterium parvum: HYN04_00015
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Entry
HYN04_00015 CDS
T05485
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
phb
Phenylobacterium parvum
Pathway
phb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HYN04_00015 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phb03019
]
HYN04_00015 (pnp)
03016 Transfer RNA biogenesis [BR:
phb03016
]
HYN04_00015 (pnp)
Enzymes [BR:
phb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HYN04_00015 (pnp)
Messenger RNA biogenesis [BR:
phb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HYN04_00015 (pnp)
Transfer RNA biogenesis [BR:
phb03016
]
Prokaryotic type
tRNA degradation factors
HYN04_00015 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
S1_RRP5
KH_2
Motif
Other DBs
NCBI-ProteinID:
AWM76281
UniProt:
A0A2Z3HSD8
LinkDB
All DBs
Position
complement(2376..4520)
Genome browser
AA seq
714 aa
AA seq
DB search
MFDIKRKTIEWGGRTLTLETGRMARQADGSVLATYGETMVLATAVYAKSAKPGQDFFPLT
VNYQEKYYAAGKIPGSFPRREAAPSQKETLTSRLIDRPIRPLFVEGFKNEVQVVATVLAH
DLENDPDIVAMVAASAALVLSGAPFMGPIGGARVGYANGEYILNPTLDQMKESAMDLVVA
GTSDAVMMVESEIQELSEEVVLGGVTFAHKAMQPVIDAIIELAEHAAKEPFEFAPDDTEA
LKAEARKLVGADLASAYKIVAKGQRHDAVSQAKAKAVAALAKSEANPTGADGQKLAGVLK
ELEAEVVRRNIIETGIRIDGRTVDKVRPIVSEVGVLTRAHGSALFTRGETQALVVATLGT
GDDEQLIDALEGKYYERFLLHYNFPPFSVGETGRMGAPGRREVGHGKLAWRAVRPMLPSH
DEFPYTLRLVSEVLESNGSSSMATVCGASLALMDAGVPLKKPVSGIAMGLILEKDGFAVL
SDILGDEDHLGDMDFKVAGTEDGITSLQMDIKIAGITEEIMRKALEQAKGGRQHILGEMA
KAMEAPRAELGEFAPKIETIKIPVDKIREVIGSGGKVIREITAETGAKVDIGEDGTIRIA
APDQAKIDAARDWIKSIASEPELGAIYTGKVVKIVDFGAFVNFFGAKDGLVHVSQISSER
VNKVSDVLQEGQSVKVKLLGFDDRGKTRLSMKVVDQETGEDLSKKESAGEDAEG
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatatcaagagaaagaccatcgagtggggcggtcgcacgctgaccctcgaaacc
ggccgcatggcccgccaggctgacggttccgtcctggccacctatggcgagacaatggtg
ctggccaccgccgtctacgccaagagcgccaagcccgggcaggacttcttccccctgacc
gtgaactaccaggagaagtactacgccgcgggcaagatccccggctccttcccccgccgc
gaggccgcgccgagccagaaggaaaccctgacctcgcgcctgatcgaccgtccgatccgg
ccgctgttcgtcgagggcttcaagaacgaggtccaggtggtcgccaccgtgctggcccat
gacctcgaaaacgaccctgacatcgtcgccatggtcgccgcctcggccgccctggtcctg
tccggcgcccccttcatgggcccgatcggcggcgcccgcgtgggctacgccaatggcgag
tacatcctgaacccgaccctcgaccagatgaaggagtcggccatggacctggtcgtcgcc
ggcacgagcgacgcggtcatgatggtggagtccgagatccaggagctctccgaagaggtg
gtcctgggcggcgtgacctttgcgcacaaggccatgcagccggtgatcgacgcgatcatc
gagctggccgagcatgcggccaaggagcccttcgagttcgcccccgacgacaccgaggcc
ctcaaggccgaggcccgcaagctggtgggcgcagacctggcgtccgcctacaagatcgtc
gcaaagggccagcgccacgacgcggtcagccaggccaaggccaaggccgtagccgccctg
gccaagtccgaagccaatccgaccggcgccgacggccagaagctggccggcgtgctgaag
gagctcgaggctgaggtcgtccgccgcaacatcatcgagacgggtatccgcatcgacggc
cggaccgtggacaaggtgcgcccgatcgtctcggaagtcggcgtcctgacccgggcccac
ggctcggccctgttcacccgcggcgagacccaggccctggtggtcgccaccctgggcacc
ggcgatgacgagcagctgatcgacgccctcgaaggcaagtactacgagcgcttcctgctg
cactacaacttcccccccttcagcgtcggcgagaccggccggatgggcgcccccgggcgt
cgggaagtgggtcatggcaagctggcctggcgggccgtccgccccatgctgccttcgcat
gacgagttcccctacaccctgcgcctggtgtccgaggtcctggagtccaacggctcctcg
tccatggccaccgtatgcggcgcgtccctggccctgatggacgccggcgtgcccctgaag
aagccggtcagcggcatcgccatgggcctgatcctcgagaaggacggtttcgccgtgctc
tccgacatcctgggcgacgaggaccacctcggcgacatggacttcaaggtggccggcacc
gaggacgggatcacctccctccagatggacatcaagatcgccgggatcaccgaggagatc
atgcgcaaggcgctggagcaggccaagggcggccgccagcacatcctgggcgaaatggcc
aaggccatggaagccccgcgcgctgagctcggtgaattcgcgcccaagatcgagaccatc
aagatcccggtggacaagatccgcgaagtgatcggctcgggcggcaaggtgatccgcgaa
atcaccgctgaaaccggcgccaaggtcgacattggcgaggatggcaccatccgcatcgcc
gcgcccgaccaggccaagatcgacgcggcccgcgactggatcaagtcgatcgcctcggag
cccgaactgggcgccatctacaccggcaaggtcgtgaagatcgtcgacttcggcgccttc
gtgaacttcttcggcgccaaggacggcctggtccacgtgagccagatctcctcggagcgg
gtgaacaaggtctctgacgtcctgcaggaaggccagtccgtgaaggtcaagcttctcggc
ttcgacgaccgcggcaagacccggctgtcgatgaaggtcgtcgaccaggagaccggcgag
gacctgtccaagaaggaaagcgccggcgaggacgccgagggctga
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