Phenylobacterium parvum: HYN04_00025
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Entry
HYN04_00025 CDS
T05485
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
phb
Phenylobacterium parvum
Brite
KEGG Orthology (KO) [BR:
phb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phb03016
]
HYN04_00025
Enzymes [BR:
phb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HYN04_00025
Transfer RNA biogenesis [BR:
phb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HYN04_00025
Prokaryotic type
HYN04_00025
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AWM76283
UniProt:
A0A2Z3HID3
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All DBs
Position
complement(5033..5962)
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AA seq
309 aa
AA seq
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MGRRKSGEAVSGWICLDKPYDLTSTQAVGRVRRIFNAQKAGHAGTLDPLATGVLPIALGE
ATKTVSFMMEAGKTYRFTIAWGRTTTTLDREGETSAASDVRPSPAATEAALPDFVGEIDQ
VPPAYSAIKVAGERAYDLARAGETVELAARRVVIHRARVTAAPDPDHVEIEIDCGKGVYV
RSLVRDLAERLGACGHVSALRRTRVGPFTEARAITLENLEDLGHKAALLDALLPVETALD
DIPELAVTTEDAFRLRQGRPIVLVPRQVDDLRTRLTSGSRTVSAMEGGSLVALCEMRMGR
LEPARVFHL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
gtggggcgacgcaagagcggcgaggcggtctcgggctggatctgcctggacaagccctat
gacctgacttccacccaggccgtcggccgggtccggaggatcttcaacgcccagaaggct
ggtcacgccgggaccctcgaccccctggccacaggcgtcctgcccatagccctgggcgaa
gcgaccaagaccgtcagcttcatgatggaggcgggcaagacctaccgcttcaccatcgcc
tggggacggacgacgaccaccctggaccgcgagggtgagacctcggcggcctccgacgtg
cggccgagccctgcagcgaccgaggcggccctgccggacttcgtcggcgagatcgaccag
gttcctcccgcctactcagccatcaaggtggccggcgaacgcgcctatgacctggcccgg
gcgggagagaccgtggagctggcggcccgccgggtggtgatccaccgggcccgggtgacc
gccgcgccggacccggaccatgtcgagatcgagatcgactgcggcaagggcgtctatgtc
cggtccctggtccgggatctggccgagcgcctcggcgcctgcggccatgtgagcgccctg
cggcggacccgggtggggcccttcacggaggcccgggcgattacactggaaaacctggag
gatctggggcataaggccgccctcctggacgccctgcttccggtcgagaccgccctggac
gacatcccggagctggccgtgaccacagaagacgcattcaggctcaggcagggacggccc
atcgttctcgttccccgacaggttgacgacctgaggacccggctcacctccggatcccgg
accgtttcagccatggagggcggttcgctggtggcgctctgcgagatgcgtatgggacgg
ctcgaacccgcacgcgtctttcacctctga
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