Phenylobacterium parvum: HYN04_00170
Help
Entry
HYN04_00170 CDS
T05485
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
phb
Phenylobacterium parvum
Pathway
phb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HYN04_00170 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phb03019
]
HYN04_00170 (recQ)
03400 DNA repair and recombination proteins [BR:
phb03400
]
HYN04_00170 (recQ)
Enzymes [BR:
phb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HYN04_00170 (recQ)
Messenger RNA biogenesis [BR:
phb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HYN04_00170 (recQ)
DNA repair and recombination proteins [BR:
phb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HYN04_00170 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HRDC
DEAD
RQC
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
AWM76309
UniProt:
A0A2Z3HUD7
LinkDB
All DBs
Position
complement(38025..39887)
Genome browser
AA seq
620 aa
AA seq
DB search
MSDDSLKEAQEVLRRVFGHPGFRGLQASVIAEVMAGRPALAVLPTGGGKSVCYQIPALLR
PGLGLVVSPLIALMADQVAGLVQAGVAAARLDSLTYPEARAATWARIEAGTLDLLYVSPE
GLLQPWMLERLSQVPLSVIAIDEAHCVSQWGHDFRPEYRQLGQLAGLFPGVPRLAVTATA
DARTRRDIREGLHLGEAREFVASFDRPELALSAERKAGTGRRRVLELAKARRDRPGVIYA
GSRDGTEALAAELCAAGLPAMAYHAGLDRDLRERRLAEFLASDAAVMVATIAFGMGVDKP
DVRYVIHADPPASIEAYWQEVGRAGRDGEPAEGITLYGAADMAWALRRLDGQALSDEVRA
VQVRKVRQLYALLDGGACRTAAVRRYFGEEGVADCGRCDNCLNPPKGADLTLQAQKVLSA
AQRLNGRYGRGRLVEHLLGKTREPSAFEAGLSTFGVGAELSAGDWRGLIDQLIFDGLLRE
DPNEGRPLIGLGDAEAVRAVYRGERRVEGRLSQGRPPGSGDGSPDGGGTPGRRRRDASET
VFEGDPQLFAALRAWRRAEAIRQKAPPYVIFSDRTLAEIATRRPADAAALSRVSGVGESK
LARYGPAVLALVAGEVPPGD
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgattcgctcaaggaggcgcaggaggtcctgcgccgtgtcttcggacacccc
gggttccgtgggcttcaggcgtcggtgatcgccgaggtcatggccgggcgtccggccctg
gccgtcctgcccaccggcggcggcaagagcgtctgctaccagatccccgccctgctgcga
ccgggcctcggcctggtggtcagccccctcatcgccctgatggccgaccaggtggcgggc
ctggtccaggccggggtggccgcggcccggctggactccctcacctatcccgaggcccgg
gccgccacctgggcgcggatcgaggccgggaccctggacctgctctatgtctcgccggag
gggctgctccagccctggatgctggagcggctgtcgcaggttcccctctcggtcatcgcc
atcgacgaggcgcactgcgtcagccagtggggccatgacttccggccggagtaccggcag
ctgggccagctggccggcctgttcccgggggtcccgcgcctggcggtcaccgccaccgcc
gacgcccggacccggcgggacatccgcgagggcctgcacctgggcgaggcccgggagttc
gtcgcctccttcgaccgaccggagctggccctgtctgccgagcgcaaggccgggaccggc
cgcaggcgggtgctggagctggccaaggcgcggcgcgaccggcccggggtgatctacgcc
ggctcccgggacgggaccgaggccctggccgccgagctgtgcgccgcgggcctgccggcc
atggcctaccacgccggcctggaccgcgacctgcgcgagcgccgcctggccgagttcctg
gcttccgacgcggcggtcatggtggcgaccatcgctttcggcatgggggtggacaagccg
gacgtccgctatgtgatccacgccgatccgcccgcctccatcgaggcctactggcaggag
gtgggccgggccgggcgcgacggcgagccggccgaggggatcaccctctacggggcggcg
gacatggcctgggccctgcgccggctggacggtcaggccctctccgacgaggtgcgcgca
gtgcaggtgcgcaaggtgcgccagctctacgccctgctggacgggggcgcctgccgcacg
gcggcggtccgccgctacttcggcgaggagggggtggccgactgcgggcgctgcgacaat
tgtttgaatcccccgaagggcgcggacctgaccctccaggctcagaaagtcctgtcggcg
gcccagcgactgaacgggcggtatggccggggccggctggtggagcacctcctcggcaag
acccgcgagccctcggccttcgaggcggggctgagcaccttcggggtcggcgccgagctt
tcggcgggggactggcgcggcctgatcgaccagctgatcttcgacggcctgctgcgcgag
gacccgaacgagggccgccccctcatcggcctgggcgacgccgaggcggtgcgggcggtc
taccgcggggagcgacgggtggagggacgcctgtcccaggggcgcccccccgggtccggg
gacggttcccccgacggtggcgggacgccgggacgacgccgccgcgacgcttcggagacc
gtcttcgagggcgatccgcaactcttcgccgcccttcgcgcctggcgccgggctgaggcg
atccgccagaaggcgccgccctatgtcatcttcagcgaccgcaccctggcggagatcgcc
acccgcaggcccgccgacgcggcggccctgtcgcgggtcagcggcgtgggcgagagcaag
ctggcccgctacggtcccgccgtcctggccctggtggcgggagaggtcccgcccggcgac
tga
DBGET
integrated database retrieval system
