Phenylobacterium parvum: HYN04_01645
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Entry
HYN04_01645 CDS
T05485
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
phb
Phenylobacterium parvum
Pathway
phb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HYN04_01645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phb03400
]
HYN04_01645
Enzymes [BR:
phb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HYN04_01645
DNA repair and recombination proteins [BR:
phb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HYN04_01645
RecFOR pathway proteins
HYN04_01645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_22
AAA_16
AAA_3
AAA_18
nSTAND3
AAA_14
Rad17
DUF815
AAA_17
TsaE
AAA_2
NTPase_1
AAA_24
NB-ARC
RNA_helicase
AAA_28
NACHT
AAA_33
ABC_tran
Parvo_NS1
AAA_25
AAA_19
bpMoxR
Bac_DnaA
IstB_IS21
Cytidylate_kin
PduV-EutP
Motif
Other DBs
NCBI-ProteinID:
AWM76581
UniProt:
A0A2Z3HT87
LinkDB
All DBs
Position
complement(338196..339242)
Genome browser
AA seq
348 aa
AA seq
DB search
MTRLVSGEPGPPEPGDRALRPQTLSEFVGQAAAKSNLSIFIDAARGRGEAMDHVLLFGPP
GLGKTTLAQIIARELGVNFRATSGPVLAKAGDLAAILTNLEPRDVLFIDEIHRLAAPVEE
ILYPAMEDHVLDLMIGEGPAARSIRIDLSPFTLVAATTRAGMLATPLRDRFGIPIRLEFY
SADELRKVLAHAAGRLGLNLTEDGAGEIAARARGTPRVAGRLLRRVRDFAEAEGAAAIDK
AAAARALARLEVDPAGLDSLDRRYLKALIENYAGGPAGLETLAYAIAEARDAVEDVIEPY
LLQQGFIQRTPRGRVACARAYEHLGLTPPPSPPPAGQAGLFEGDGDAD
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
gtgacccgcctggtctccggggaacccgggccgcccgagcccggcgaccgcgccctgcgg
ccccagaccctgtcggaattcgtcggccaggcggccgccaagtcgaacctctccatcttc
atcgacgccgcacgcggccggggcgaggccatggaccacgtcctgcttttcggcccgccg
ggcctgggcaagaccaccctggcccagatcatcgcccgggagctgggggtgaacttccgc
gccacctcagggccggtcctggccaaggccggcgacctggcggccatactgaccaacctc
gagccgcgcgacgtcctgttcatcgacgagattcaccgcctggcggcgccggtggaggaa
atcctctatcccgccatggaagaccatgtcctcgacctgatgatcggcgaggggccggcg
gcccggtcgatccgcatcgacctttccccctttacactcgtggcggcgaccacccgggcc
gggatgctggccacccccctgcgggaccggttcggcatcccgatccggctggagttctac
tccgccgacgagttgaggaaggttctggcccatgcggcggggcggctggggctcaacctg
accgaagacggcgccggcgagatcgccgcccgggcccggggcacgccgcgggtggccggg
cgtctgctgaggcgggtgcgagacttcgccgaggccgagggcgccgccgccatcgacaag
gccgccgccgcccgggccctggcccggctggaggtggaccccgccggcctggacagcctg
gaccgccgctatctcaaggccctgatcgagaactatgccggcggcccggccgggctggaa
accctggcctacgccatcgccgaggcccgggacgcggtcgaggacgtcatcgagccctac
ctgctccagcagggcttcatccagcgcacgccccgggggcgggtcgcctgcgcccgggcc
tacgagcacctcggcctgaccccgccgccctcgccgcctccagccggacaggccgggctc
ttcgaaggagacggcgatgccgactga
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