Phenylobacterium parvum: HYN04_02165
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Entry
HYN04_02165 CDS
T05485
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
phb
Phenylobacterium parvum
Pathway
phb00300
Lysine biosynthesis
phb00470
D-Amino acid metabolism
phb01100
Metabolic pathways
phb01110
Biosynthesis of secondary metabolites
phb01120
Microbial metabolism in diverse environments
phb01230
Biosynthesis of amino acids
Module
phb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
phb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HYN04_02165 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HYN04_02165 (lysA)
Enzymes [BR:
phb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HYN04_02165 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AWM76671
UniProt:
A0A2Z3HTH2
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All DBs
Position
complement(449843..451135)
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AA seq
430 aa
AA seq
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MNHFELRDGELHCEAVPLSQIAKAVGTPVYVYSSATLERHFNVLASALREAGLKGEDGGA
PLVAYAVKANPNLSVLATLARLGAGADTVSEGEIRRALAAGVPASRIVFSGVGKQAGEIA
FALQSGISEINVESEPEMRLIARVAGGLGQPARIAFRVNPDVTAGGHAKIATGGADNKFG
VSFSEAERLYAEAAADPWLRPVGLTCHIGSQITALEPMEAAFRRMRELVERLRARGLEVR
RLDLGGGLGVPYFNQPEPPSPADYAEMVARVTKGLDVGLAFEPGRVIAANAGILLAEVLH
IHLRPEGRRFVVLDAAMNDLIRPAMYDAYHDLRPVRPRSGPTAIADVVGPVCETGDTFTR
DRELPPLEAGDLVAFMSAGAYGASMSSEYNSRLLVPEVLVRGAEWAVVRPRPTYDDMLAR
ETRPPWLDQA
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaaccatttcgagcttcgcgacggcgagcttcactgcgaggcggttcccctctctcag
atcgccaaggctgtcggcacgcccgtctatgtctactcctcggccaccctggagcggcac
ttcaacgtcctggcctcggccctccgcgaggcgggcctgaagggggaggatgggggcgcg
cccctggtcgcctacgccgtgaaggccaatcccaacctgtcggtcctggccaccctggcg
cgtctcggcgccggggcggacacggtctcggagggcgagatccgccgggccctggcggcc
ggtgttcccgcctcgcggatcgtcttttccggggtggggaagcaggcgggcgagatcgcc
ttcgccctgcagtccggcatttccgagatcaacgtcgagtccgagcccgagatgcggctg
atcgcccgggtggccggcgggctgggccagccggcccggatcgccttccgggtgaaccca
gacgtcacggcgggcggtcacgccaagatcgccacgggcggggcggacaacaagttcggc
gtgtccttctccgaggccgagaggctgtacgccgaggccgccgccgacccctggcttcgg
ccggtcggcctgacctgccacatcggcagccagatcaccgccctggagcccatggaggcc
gccttccgccgcatgcgcgagctggtcgagcgccttcgcgcccggggcctggaggtgcgg
cggctcgacctcgggggcggcctgggcgtgccctacttcaaccaaccggaacccccctct
ccggccgactacgccgagatggtcgcccgggtgaccaagggactggacgtcggcctcgcc
ttcgagccgggccgggtgatcgccgccaacgcggggatccttctggccgaggtcctgcac
atccacctccggcccgagggacgccggttcgtggtgctggatgcggcgatgaacgacctg
atccggccggccatgtacgacgcctaccacgacctgcggcccgtccggccgaggtccggc
ccgaccgccatcgcggacgtggtcggcccggtctgcgagaccggcgacaccttcacccgg
gaccgcgaactgccgcccctcgaggccggggacctggtggccttcatgagcgccggagcc
tacggggcctccatgtccagcgagtacaacagccggctcctggttccggaagtcctggtg
cggggtgcggaatgggcggtggtccgcccgcggccgacctacgacgacatgctggcccgc
gagacccggccgccctggctcgatcaggcctga
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