Phenylobacterium parvum: HYN04_02370
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Entry
HYN04_02370 CDS
T05485
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
phb
Phenylobacterium parvum
Pathway
phb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
phb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HYN04_02370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phb03400
]
HYN04_02370
Enzymes [BR:
phb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HYN04_02370
DNA repair and recombination proteins [BR:
phb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HYN04_02370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Gly_transporter
RecJ_OB
Apolipoprotein
Motif
Other DBs
NCBI-ProteinID:
AWM76706
UniProt:
A0A2Z3HRD7
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All DBs
Position
complement(488275..489678)
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AA seq
467 aa
AA seq
DB search
MSELDPDSAPDDSDNARAYSVSELAFALKRTLEDRYGFVRLKGELSKVTHHSNGHVYLSL
KDERAVIDGVVWKGSVRNLSVRPEQGLEVIVTGKITTYPQGSRYQIVIESMTAAGAGALL
AQLERLKARLAAEGLFEASRKQPLPALPAVVGVVTSPTGAVIRDILHRIRDRWPCHVLVW
PVVVQGDAAAAQVAAAVRGFNDLPADGPVPRPDVVIVARGGGSVEDLWPFNDEALARTVA
ASRIPLVSAVGHETDTTLIDFVSDRRAPTPTAAAEMATPVLSELRGTLTDLTGRLHRAGG
RIVSERKVRLEALGRTLARAPDLVELAEQRLGMASSRLSAGLTRNVGAHETQLARISGRL
QPGLLTRPREARSETLSALALRMRPALERSLSRSEERLAALTARLKSADPGAPLSRGFAR
VHRADGTLVRQGAGLTAGEAVRLVFADTERGAVIEPPAGAPRQGDLF
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaactggatccagattccgcgccggatgattcggacaatgcgcgcgcctactcg
gtctccgagctggccttcgccctcaagcgcaccctcgaggaccgctacggcttcgtccgg
ctgaagggcgagctttccaaggtcacgcaccactccaacggccacgtctacctgtccctc
aaggacgagcgggcggtgatcgacggggtggtctggaagggctccgtgcggaacctgtcc
gtccggcccgaacagggcctggaagtgatcgtcacgggtaagatcacgacctacccccag
ggctcccgctaccagatcgtcatcgagagcatgaccgccgccggggccggggccctcctg
gcccagctggagcggctgaaggcccggcttgcggccgagggcctgttcgaggcgtcccgc
aaacagcccctgcccgccctgcccgccgtggtcggcgtcgtcacctcgcccaccggggcg
gtgatccgcgacatccttcaccgcatccgcgaccgctggccctgccacgtcctggtctgg
ccggtggtcgtgcagggagacgccgccgccgcccaggtggccgccgcggtgcgcggcttc
aacgacctgcccgccgacggccccgtgcccaggccggacgtggtgatcgtcgcccggggc
ggcggctcggtggaagatctctggcccttcaacgacgaggccctcgcccggacggtggcc
gccagccggatcccgctggtctcggcggtcggccacgagaccgacaccaccctcatcgac
ttcgtctccgaccgtcgggcgcccacgcccacggcggcggccgagatggccacaccggtc
ctgtccgaactgcggggaacccttacggacctcactggccgcctgcaccgggcgggcggg
cggatcgtctctgaacgcaaggtgcggctggaggccctgggacgcaccctggcccgggcg
ccagacctggtggagctggccgagcagaggctgggcatggcgagcagtcgcctctcggcc
ggccttacccggaacgtcggcgcgcacgagacccaactcgcccggatctccggccggctg
cagccggggctcctcacccgcccgcgggaggcccgctcggaaaccctctccgccctggcc
ttgcggatgcgtccggccctggaacggtccctgtcccggtccgaagagcgcctggccgcc
ctgacggcgcggctgaaatcggcggatcccggcgcgcccctgtcccggggcttcgcccgg
gtgcacagggcggatgggaccctggtccgccagggtgcaggactgaccgccggcgaggcc
gtccgcctggtcttcgccgataccgagcgcggggcggtgatcgagccgccggcgggcgcg
ccgcgccagggcgacctcttctga
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