Phenylobacterium parvum: HYN04_04195
Help
Entry
HYN04_04195 CDS
T05485
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
phb
Phenylobacterium parvum
Pathway
phb03420
Nucleotide excision repair
phb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
phb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HYN04_04195
03430 Mismatch repair
HYN04_04195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phb03400
]
HYN04_04195
Enzymes [BR:
phb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HYN04_04195
DNA repair and recombination proteins [BR:
phb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HYN04_04195
MMR (mismatch excision repair)
Other MMR factors
HYN04_04195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AWM77025
UniProt:
A0A2Z3HQF6
LinkDB
All DBs
Position
complement(878241..880598)
Genome browser
AA seq
785 aa
AA seq
DB search
MSETESHDGGGERPLSLSQRAAAGLRPVGEPDYLKGLNPEQREAVEAVDGAVLVLAGAGT
GKTRVLTTRLAHILATGRARPWEILAVTFTNKAAREMRERLAAILGPEAEGLRWLGTFHS
IAAQILRRHAEIVGLKSTFTILDTDDQERLIKQVMEAANIDVKRWTPKALAGLIDHWKNR
GWTPEKLPSSEGAGFAGNKVQELYRAYQERLRVLNACDFGDLLLHNLTLLQARPDILEEY
HRRFRYILVDEYQDTNVAQYLWLRLLGQSRGNVCCVGDDDQSIYGWRGAEVDNILRFEKD
FPGAKVIRLERNYRSTAHILGAASGLIAANRGRLGKTLWTEAEGGAKVLVRGVWDGEAES
RLVAEEIERAHRGERDEAPLAYRDMAILVRASFQMRAFEERFVLMSIPYTVVGGPRFFER
AEIRDAHAYLRLVQSPDDDLAFERIINTPRRGIGEASVQKLFQIARASGVSALAAAREAA
VTDELPARTRTSLANFLRDLDRWTALARDTHHARVTEAILEESGYTDALRADRTPTAQTR
LENLKELVQSMDAFDTLQAYLEHVSLVMDMDRGPQADAVQIMTLHSAKGLEFPLVFLPGW
EEGVFPSQRSLDETGEKGLEEERRLAYVGLTRARKSARISFAANRLVYGRWTSQLPSRFV
DELPEAHVEAVSETGYFSGGPGMQAASSRWDETPAFGSGYDSPGWRRAQDRPRPAAPVNR
KAVIEGEGRLLAVSDPQSSAFARGDRVFHQKFGYGRVLVAEGSKLTVAFDKAGEKKVLDS
FVEKA
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagacggaatcacacgacggcgggggcgagcggcccctgagcctcagccagagg
gcggcggcgggcctgcgcccggtgggcgagcccgactacctcaaggggctcaaccccgag
cagcgcgaggccgtggaggcggtcgacggcgccgtcctggtgctggcgggcgccggcacg
ggcaagacccgggtgctgacgacgcggctggcccacatcctggccaccggccgggcccgg
ccctgggagatcctcgccgtcaccttcaccaacaaggccgcgcgggagatgcgcgagcgc
ctggccgccatcctggggcccgaggccgagggcctgcgctggctgggcaccttccactcc
atcgccgcccagatcctgcgccggcacgccgagatcgtcgggctgaagtccaccttcacc
atcctcgacaccgacgaccaggagcgcctgatcaagcaggtgatggaggcggcgaacatc
gacgtgaagcggtggacgcccaaggccctggccggcctgatcgaccactggaagaaccgc
ggctggacgcccgagaagctgccctcctccgagggcgcgggcttcgccggcaacaaggtg
caggagctctaccgggcctaccaggagcgcctgagggtgctgaacgcctgtgacttcggc
gacctcctgctgcacaacctgaccctgctccaggcccggccggacatcctggaggagtat
caccgccgcttccgctacatcctggtcgacgagtaccaggacaccaatgtcgcccagtac
ctctggctgcgcctgctgggccagtcgcggggcaatgtctgctgtgtgggtgacgacgac
cagtcgatctatggctggcggggcgccgaggtggacaacatcctgcgcttcgaaaaggac
ttcccgggcgccaaggtcatccggctcgagcgcaactaccgctccaccgcccacatcctg
ggggccgcctcgggcctgatcgccgccaaccgcggccggctgggcaagaccctgtggacc
gaggcggaaggcggggccaaggtcctggtgcgcggggtctgggacggcgaggccgagagc
cgcctcgtggccgaggagatcgagcgcgcccaccggggcgagcgcgacgaggcgcccctc
gcctatcgcgacatggccatcctggtccgggcctccttccagatgcgcgccttcgaggaa
cgctttgtcctcatgtccatcccctacacggtggtgggcgggccgcgcttcttcgagcgg
gccgagatccgcgacgcccacgcctatctgcgcctggtccagtcgccggacgacgacctg
gccttcgagcgcatcatcaacaccccgcgccggggcatcggcgaggcctcggtccagaag
ctgttccagatcgcccgggcctcgggcgtctcggccctggccgccgcccgggaggccgcc
gtcaccgacgagctgccggcccgcacccgcacctccctggcgaacttcctgcgcgacctg
gatcgctggacggccctggcccgcgacacccaccacgcccgcgtgaccgaggccatcctc
gaggaaagcggctacaccgacgcccttcgcgccgaccgcacccccaccgcccagacccgg
ctggagaacctgaaggaactggtccagtccatggacgccttcgacaccctgcaggcctat
ctcgagcacgtctccctggtcatggacatggaccggggcccccaggccgacgccgtgcag
atcatgaccctgcactcggccaaggggctggagttccccctggtcttcctgcccggctgg
gaggaaggggtcttcccctcccagcgcagcctcgacgagaccggcgagaagggcctcgag
gaagagcggcgcctggcctatgtcggcctgacccgggcgcggaagtcggcgcggatcagc
ttcgccgctaaccgcctcgtctatggccgatggaccagccagctgcccagccgcttcgtg
gacgaactgccggaggcccatgtcgaggcggtctccgagaccggctatttcagcggcggg
ccgggcatgcaggcggcgtcgagccgctgggacgagaccccggccttcggctccggctac
gactctcccggctggcggcgggcccaggaccggccccgtccggccgctcccgtcaaccgc
aaggcggtcatcgagggcgagggccggcttctcgccgtctccgacccccagtccagcgcc
tttgcccggggcgaccgggtcttccaccagaagttcgggtatggccgggtcctcgtcgca
gagggctcaaagctgaccgtggccttcgacaaggccggcgagaagaaggtgctcgacagc
ttcgtcgagaaggcctga
DBGET
integrated database retrieval system
