Phenylobacterium parvum: HYN04_04260
Help
Entry
HYN04_04260 CDS
T05485
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
phb
Phenylobacterium parvum
Pathway
phb00550
Peptidoglycan biosynthesis
phb01100
Metabolic pathways
phb01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
phb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HYN04_04260 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HYN04_04260 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
phb01011
]
HYN04_04260 (mrdA)
Enzymes [BR:
phb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HYN04_04260 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
phb01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HYN04_04260 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
TP_methylase
Motif
Other DBs
NCBI-ProteinID:
AWM77037
UniProt:
A0A2Z3HMV5
LinkDB
All DBs
Position
891226..893148
Genome browser
AA seq
640 aa
AA seq
DB search
MTQPSIILSDVNARQSVFHRRTFLLGGAIALGVSTLAGRLAYLQLAENARYAKLSTSNQF
NFRLVPPPRGLITDRNGAILATNRPNFRLLYARQKDQDPEAMVATLANYVPMDDQRRQRV
LRDLGNAPRNTPVAIMEDITWEQFSAVNIRTTELPGVTADMGEVRVYPHGGAFAHVIGYV
AKVNKEDITETGPNAEPIMLHPGFRIGRQGLEKALDLELRGRPGAQKVEVDARGRQVRLA
PGGDIPATPGKEVQLSLDMDLQLRGLEMFGEESGAAVLMDCESGDLLAMVSAPSFDANRF
VRGLGGAEYRALAEYDHKPLFNKALTATYPPGSTFKTLVAVAALEHGIDPDMTVNCPGYW
TFGNRRWRCDGVHGRTSMHNAIATSCDTYFYIVSLQLGPDKIAAVARRFGLGQAYDLGIP
GQKKGLIPDTEYKRRNFRRDPVWHPGETPSMGIGQGYTLVTALQQCVAAARMANGRKALV
PRLIRSVGGVPKPDAAEAPDLGFDPAHLAFVREAMGAVTTRGTAARTGQIGLGDIRMAGK
TGTAQGYNYNGGRGVHGTNGPWHLRDHAWFVGFAPHDTPRYAVAVLVEHGGFGAQAAAPR
ARDLMRLALLKDPELRGRIERPPAAVSVADSRDPAQGGPA
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgacccagccgtcgatcatcctttccgacgtcaacgcccggcagagcgtcttccaccgc
cgcaccttcctcctgggcggcgccatcgccctcggggtttcgaccctggccggccggctc
gcctatctccagctggccgagaacgcccgctacgccaagctgtcgacctccaaccagttc
aacttccgcctggtccctccgccccgcgggctgatcaccgaccgcaacggcgcgatcctg
gcgacaaaccggccgaacttccgcctgctctacgcccggcagaaggaccaggaccccgag
gccatggtcgccaccctggccaactacgtcccgatggacgaccagcgtcgccagcgcgtc
ctcagggaccttggcaacgccccccggaacacgccggtcgccatcatggaggacatcacc
tgggagcagttctccgcggtgaacatccgcaccacagagttgcccggcgtgacggccgac
atgggggaggtgcgggtctatccgcacggcggcgccttcgcccacgtcatcggctacgtg
gccaaggtgaacaaggaggacatcaccgagaccggcccgaacgccgagcccatcatgctg
caccccggcttccggatcggccgacagggcctggagaaggcgctcgaccttgagctccgt
ggccgccccggcgcccagaaggtggaggtggacgcccgcggccggcaggtgcggctggct
cccggcggcgacattcccgccaccccgggcaaggaggtccagctgagcctcgacatggac
ctgcaactgcggggcctggagatgtttggtgaggagagcggggcggcggtgctgatggac
tgcgagtcgggggacctcctggcgatggtctctgcgcccagctttgacgccaaccgcttt
gtccggggcctcggtggagctgagtaccgggccctggcggagtatgaccacaagccgctg
ttcaacaaggcgctgaccgccacctatccgccgggctcgaccttcaagaccctggtggcg
gtggcggcgctggagcacggcatcgatcccgacatgacggtgaactgccccggctactgg
acattcggcaaccgtcggtggcgatgcgacggggtccacgggcggacgagcatgcacaac
gccatcgccacttcgtgcgacacctacttctacattgtctccctgcaactcggccccgac
aagatcgcggccgtggcccggcgcttcggccttggccaggcctacgacctcggcattccc
ggccagaagaaggggctgattcccgacaccgagtacaagcgccggaacttccggcgcgat
ccggtctggcatcccggcgagacccccagcatggggatcggccagggctacaccttggtc
accgccctgcagcagtgcgtggcggcggcgcgcatggccaatggccgcaaggcccttgtc
ccgcgcctgatccgctccgtgggcggagtcccaaagcccgacgccgccgaggctccggac
ctgggcttcgacccagctcacctggccttcgtccgcgaggccatgggcgccgtgaccacc
cggggcacggctgcccgcacgggccagattggactgggcgacatccggatggccggaaag
accgggacggcccagggctacaactacaatggcggccgtggggtccatggcaccaacggt
ccctggcatctgcgcgaccacgcctggttcgtcggcttcgcgccccacgatacgccccgc
tatgcggtggcggtgctggtcgagcatgggggcttcggggcgcaggcggcggcccccaga
gcccgggacctgatgcgccttgccctcctgaaggacccggagcttcggggccggatcgag
cgccccccggcggcggtctcggtggccgacagccgagacccggcgcaggggggtcccgca
tga
DBGET
integrated database retrieval system
