Phenylobacterium parvum: HYN04_04655
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Entry
HYN04_04655 CDS
T05485
Name
(GenBank) murein L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
phb
Phenylobacterium parvum
Brite
KEGG Orthology (KO) [BR:
phb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
phb01002
]
HYN04_04655
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
phb01011
]
HYN04_04655
Peptidases and inhibitors [BR:
phb01002
]
Cysteine peptidases
Family C82
HYN04_04655
Peptidoglycan biosynthesis and degradation proteins [BR:
phb01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
HYN04_04655
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Scaffold
Motif
Other DBs
NCBI-ProteinID:
AWM77110
UniProt:
A0A2Z3HUV1
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All DBs
Position
965135..966478
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AA seq
447 aa
AA seq
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MKPNRLLAVVALVLGLAGPVRAAAPEGLVLTAGDRSALVGAFGRAGLAPPAADTGDAALW
NAVERLARVELGQSLRPSEIDPLWDLAAPSRRVEAEMLQAHAQGRLAAWAGSISPDAPAY
LALARARLRYAAIAAEGGWPALSANLRLRPGDSGEGVEALRRRLAAEGDAPQDPPRPDRF
DAPLRKALAGWQARNGLDDDGVLGPATLRRLNVPVQDRLGRIEANMERWRWMPRALPADR
LEIDTGGAVGALYRDGRVVHAFRVIPGAVKDPTPIFQSRLNAVVLNPPWNVPDRIAREEL
LPRAARDPDYLARNGFIQTGGRLQQKPGPKSALGRVKFDLVSPFGVYLHDTPGRDAFQRA
ERHLSHGCMRVESPLVLADLLLAPQGRGGSRMQSDLAAGATLRVALVRQEPLFVVHWTVK
TEPDGRAGFLDDVYGWDARLATELARM
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgaaccgccttctcgccgtcgtcgcccttgttctcgggctcgcgggacccgtc
cgggcggcggcgcccgaaggcctggtcctcacggccggcgatcgttcggccctggtcggg
gccttcggacgcgcgggcctggcgccgcccgccgctgataccggagacgccgccctctgg
aacgccgtcgagcggctggcccgggttgagttggggcagtccctgcggccttccgaaatc
gatccgctctgggatcttgcagccccgtcccgcagggtggaggcggaaatgctccaggcg
catgcccagggccggctggcggcctgggcggggtcgatctcgccggacgcgccggcctat
ctggccctcgccagggcccggctccggtacgcagccatcgccgccgagggcggctggccc
gccctgtccgccaaccttcgtctcaggccgggagactccggcgagggggtcgaggccctg
cgtcggcggctcgcggcagagggcgatgcgccgcaggatccgccccgcccggaccgcttt
gacgcccccctgcgaaaggccctcgccggttggcaggcccggaacggccttgacgacgac
ggggtgcttgggcccgcgaccctccgccggctgaatgtcccggtccaggatcggctgggg
cggatcgaggccaacatggagcgctggcgctggatgccccgcgcccttcccgccgacagg
ctcgagatcgatacgggcggcgccgtcggcgcgctctaccgggacggccgagtggtccac
gccttccgggtgatccccggcgcagtgaaggaccccaccccgatcttccagtcccgcctg
aacgccgtcgtcctcaatccgccctggaacgtgcccgaccgaatcgcccgggaggaactc
ctgccccgggccgcccgcgacccggactatctcgcccgcaatggcttcatccagaccggc
ggacggctgcagcagaagccgggccccaagagcgccctcggccgggtcaagttcgacctg
gtcagcccctttggcgtctacctgcacgatacccccgggcgcgacgccttccagagggcc
gagcgtcacctcagccacgggtgcatgcgggtggaatcccccctggtcctggcggacctg
ctgctggccccccagggccggggcggaagccggatgcagtctgacctggcggctggtgcg
accctgcgcgtcgcactggtccggcaggagccccttttcgtcgtgcactggacggtgaag
acggagcccgatggccgggccggtttcctcgacgatgtctatggctgggacgcccggttg
gcgacggagcttgcgcgaatgtga
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