Phenylobacterium parvum: HYN04_06225
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Entry
HYN04_06225 CDS
T05485
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
phb
Phenylobacterium parvum
Pathway
phb00260
Glycine, serine and threonine metabolism
phb00460
Cyanoamino acid metabolism
phb00630
Glyoxylate and dicarboxylate metabolism
phb00670
One carbon pool by folate
phb00680
Methane metabolism
phb01100
Metabolic pathways
phb01110
Biosynthesis of secondary metabolites
phb01120
Microbial metabolism in diverse environments
phb01200
Carbon metabolism
phb01230
Biosynthesis of amino acids
phb01240
Biosynthesis of cofactors
phb04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
phb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HYN04_06225 (glyA)
09102 Energy metabolism
00680 Methane metabolism
HYN04_06225 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HYN04_06225 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HYN04_06225 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HYN04_06225 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HYN04_06225 (glyA)
Enzymes [BR:
phb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HYN04_06225 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
DUF3368
Motif
Other DBs
NCBI-ProteinID:
AWM77396
UniProt:
A0A2Z3HT83
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All DBs
Position
1281253..1282548
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AA seq
431 aa
AA seq
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MTTQTLAAGVPAGFFSASVAQSDPALAAVLDGELRRQQDQIELIASENIVSQAVLEAQGS
VLTNKYAEGYPGKRYYGGCEVVDEAEALAIERAKTLFGCDFANVQPHSGSQANQAVFMAT
LVPGDTFMGMDLAAGGHLTHGKSVNQSGKWFRPVSYAVRSQDHLIDYDQAAELALAEKPK
VIIAGGSAYSRHIDFARFRQIADSVGAILMADIAHYAGLVAGGVYPNPFPHAHVVTTTTH
KTLRGPRGGLILTNDKKLAKKLDSAVFPGLQGGPLMHVIAAKAVAFGEALRPEFKAYARQ
VVDNARALADSLQQAGFRIVSNGTDSHLMLVDLTPKGVNGADAEIALERAGITTNKNGIP
FDPLPPVQTSGIRVGTPAGTTRGFGEDEFRQVGRWIGEVLDGVAAGGDNSAVEARVRGEV
LALTKRFPIYG
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaccacacagaccctcgccgccggcgtcccggcgggcttcttctcggcttcggtcgcg
cagtccgacccggcgctcgccgccgtgctggacggagaactgcgccgccagcaggaccag
atcgagctgatcgcctccgagaacatcgtctcgcaggcggtgctggaggcgcagggctcg
gtcctgaccaacaagtacgccgagggctatccgggcaagcgctattacggcggctgcgag
gtggtggacgaggccgaggcccttgccatcgagcgggccaagaccctgttcggctgcgac
ttcgccaacgtccagccgcactcgggcagccaggccaaccaggcggtcttcatggccacc
ctggtccccggcgacaccttcatgggcatggacctggccgccggcggccacctgacccac
ggcaagagcgtcaaccagtcgggcaagtggttccggccggtctcctatgccgtgcgcagc
caggaccacctcatcgactacgaccaggccgccgaactggccctggccgagaagcccaag
gtgatcatcgccggcggctcggcctattcccggcacatcgacttcgcccgtttccggcag
atcgccgattccgtcggcgccatcctgatggccgacatcgcccactacgccgggctcgtg
gccgggggcgtctaccccaatcccttcccgcacgcccacgtggtgacgaccaccacccac
aagaccctgcggggtccgcgcggcggcctgatcctgaccaacgacaagaagctggcgaag
aagctggactcggcggtcttcccgggcctgcagggcggtccgctcatgcacgtcatcgcc
gccaaggccgtggccttcggcgaggccctccggccggagttcaaggcctatgcccggcag
gtggtcgacaacgcccgggccctggccgacagcctgcagcaggccggcttccggatcgtg
tcgaacggcaccgacagccacctgatgctggtggacctgacgcccaagggcgtgaacggg
gccgacgccgagatcgccctcgagcgcgccggcatcaccacgaacaagaacggcattccc
ttcgacccgcttccgccggtccagacctcggggatccgcgtcggcacgccggccggcacg
acccggggcttcggcgaggacgagttccgccaggtcggccgctggatcggcgaggtcctc
gacggggtggcggccggcggcgacaactcggccgtcgaggcgcgggttcggggcgaggtc
ctggccctcacgaaacgctttcccatctacggctga
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