Phenylobacterium parvum: HYN04_06545
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Entry
HYN04_06545 CDS
T05485
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
phb
Phenylobacterium parvum
Pathway
phb00061
Fatty acid biosynthesis
phb00071
Fatty acid degradation
phb01100
Metabolic pathways
phb01212
Fatty acid metabolism
phb02024
Quorum sensing
phb04146
Peroxisome
Module
phb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
phb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HYN04_06545
00071 Fatty acid degradation
HYN04_06545
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HYN04_06545
09145 Cellular community - prokaryotes
02024 Quorum sensing
HYN04_06545
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
phb01004
]
HYN04_06545
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phb04147
]
HYN04_06545
Enzymes [BR:
phb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HYN04_06545
Lipid biosynthesis proteins [BR:
phb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HYN04_06545
Exosome [BR:
phb04147
]
Exosomal proteins
Exosomal proteins of breast milk
HYN04_06545
Exosomal proteins of breast cancer cells
HYN04_06545
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF7369
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AWM77451
UniProt:
A0A2Z3HVQ6
LinkDB
All DBs
Position
complement(1350227..1351771)
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AA seq
514 aa
AA seq
DB search
MGKLWCGDRETTAEAIRERALKAASGLESLGVKEGDAVAFCLRNEFAFFEIGQAAGILGA
FPVAVNWHCTLDEADYILKDCGARVLVIHADLLASLRPAVPEGVRILSVRTPQEVAGAYG
LAPGACEVAPGDLEWGPWLESFAPWSGQARRAPSTIIYTSGTTGRPKGVKRGAASDEQAQ
ASTAMLLRSYGYADRMDRPQAIVTAVVGPIYHSAPNAHSNVSVNIGANVAVMPRFDPEAL
LALIQEKQITHLNMAPIMFNRLVKLPQAVRDRYDLSSLRFVAHAAAPVSPPVKREMIEWW
GPVINEYYGSTEMGNVTFCTSEEWLAHPGTVGKPMPNAIVRVVDAEGNDCAVGVPGEVLG
RNIGSVDFTYHGDEAKRRRAEKFGLISPGDIGYFDADGFLHLCDRSSDMVISGGVNIYPA
EIEAVLLKMPGVADCAVFGIPDDEYGEALCAVVQPQDGQDIAAQDVRIWIRSQLAGFKVP
REVQFSAALPREDSGKIFKRKLREPWWEGRERRI
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagctgtggtgcggcgatcgcgagacgacggccgaggcgatccgggaacgcgcc
ctgaaggccgcctccggtctggaaagcctgggggtgaaggagggcgacgccgtcgccttc
tgcctgaggaacgaattcgccttcttcgagatcggccaggctgccggcatcctcggagcc
tttcccgtcgccgtgaactggcactgcaccctggatgaggcggactatatcctgaaggac
tgcggggcccgggtattggtcatccacgccgacctgctggccagcctccgccccgcggtt
ccggagggggtccggatcctcagcgtccgcacgccccaggaagtcgcgggcgcctacgga
cttgcgcccggggcctgcgaggtcgcgccgggcgacctggaatggggtccctggctggaa
agcttcgccccctggtcggggcaggcgcggcgggcgcccagcaccatcatctacacctcc
ggaacgacgggaaggcccaagggcgtcaagcgtggggcggccagcgacgagcaggcccag
gcctctacggccatgctgctgcgctcctacggctacgccgacaggatggaccggccccag
gcgatcgtcaccgccgtcgtgggcccgatctaccattccgccccgaacgcccattcgaac
gtctcggtgaacatcggcgccaatgtcgccgtcatgcctaggtttgaccccgaggccctg
cttgccctgatccaggagaagcagatcacccacctgaacatggcgcccatcatgttcaac
cggctggtgaagctgcctcaggccgtacgggaccgctacgacctgtcgtccctccggttc
gtggcccacgctgcagcgccggtctcgcccccggtgaagcgcgagatgatcgagtggtgg
gggccggtgatcaacgagtactacggctcgaccgagatggggaacgtcaccttctgcacc
tcggaggaatggctggcccatccagggactgtgggaaagcccatgccaaacgccatcgtc
cgggtggtcgatgcggagggaaatgactgtgcagtcggcgttcccggcgaagtgctgggc
cgtaacataggctcggtggacttcacctaccacggcgacgaggccaagcggcggcgggcg
gagaagttcggcctgatctcgccgggggacatcggctacttcgacgccgacggattcctt
cacctctgtgaccgcagttccgacatggtgatcagtggcggggtgaacatctacccggcc
gagatcgaggccgtgctgctcaagatgccgggcgtggccgactgcgccgtcttcggcatc
ccggacgatgaatacggagaggccttgtgcgccgtggtccagccccaggacggccaggac
atcgccgcccaggacgtcaggatctggatccgcagccagctggcgggcttcaaggtcccg
cgggaggtgcagttcagcgccgcactgccccgcgaagactccggcaagatcttcaagcgc
aagctgcgcgagccctggtgggagggacgcgagcggcggatctga
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