KEGG   Phenylobacterium parvum: HYN04_06785
Entry
HYN04_06785       CDS       T05485                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
phb  Phenylobacterium parvum
Pathway
phb00010  Glycolysis / Gluconeogenesis
phb00020  Citrate cycle (TCA cycle)
phb00260  Glycine, serine and threonine metabolism
phb00280  Valine, leucine and isoleucine degradation
phb00310  Lysine degradation
phb00380  Tryptophan metabolism
phb00620  Pyruvate metabolism
phb00630  Glyoxylate and dicarboxylate metabolism
phb00640  Propanoate metabolism
phb00670  One carbon pool by folate
phb00785  Lipoic acid metabolism
phb01100  Metabolic pathways
phb01110  Biosynthesis of secondary metabolites
phb01120  Microbial metabolism in diverse environments
phb01200  Carbon metabolism
phb01210  2-Oxocarboxylic acid metabolism
phb01240  Biosynthesis of cofactors
Module
phb_M00009  Citrate cycle (TCA cycle, Krebs cycle)
phb_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
phb_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
phb_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:phb00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    HYN04_06785 (lpdA)
   00020 Citrate cycle (TCA cycle)
    HYN04_06785 (lpdA)
   00620 Pyruvate metabolism
    HYN04_06785 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    HYN04_06785 (lpdA)
   00640 Propanoate metabolism
    HYN04_06785 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    HYN04_06785 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    HYN04_06785 (lpdA)
   00310 Lysine degradation
    HYN04_06785 (lpdA)
   00380 Tryptophan metabolism
    HYN04_06785 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    HYN04_06785 (lpdA)
   00670 One carbon pool by folate
    HYN04_06785 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:phb04147]
    HYN04_06785 (lpdA)
Enzymes [BR:phb01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     HYN04_06785 (lpdA)
Exosome [BR:phb04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   HYN04_06785 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 NAD_binding_8 FAD_oxidored FAD_binding_2 HI0933_like GIDA AlaDh_PNT_C Thi4 2-Hacid_dh_C DAO 3HCDH_N FAD_binding_3 Lycopene_cycl Trp_halogenase
Other DBs
NCBI-ProteinID: AWM77495
UniProt: A0A2Z3HRT7
LinkDB
Position
complement(1411786..1413186)
AA seq 466 aa
MDFDLVVIGAGPGGYVAAIRAAQLGLKVAIVERDKLGGICLNWGCIPTKALLKSAEAFET
LGHLEDYGLRAEKVSFDLDAVVARSRKVAGQLNAGVAFLMKKNKITVIEGEARLEAGAPS
PVVRVALKAGGERILKAANVILATGARARTLPDLGLVPDGERVWSYREAMVPDRVPTSLL
VVGSGAIGIEFASFYKALGSEVTVIEALPRILPVEDEEVSAAAQKAFEARGIAFRTGASV
RRLAPSGKSVELTVEAGGVTEVLKAEVAIVAVGIVGNVEGLGLEALGVTIEKTHVVTDSH
GATGVPGLWAIGDLAGPPWLAHKASHEGVHCVEHIAGQKPSGLTAPIPGCTYASPQIASV
GLTEAQAKARGLEVKVGRFPLRANGKAIAAGHTEGFIKTVFDAATGALVGAHMIGADVTE
MIQGYALAMTLEATEADLFATVFPHPTISEGMHEAALDAFGWALHT
NT seq 1401 nt   +upstreamnt  +downstreamnt
gtggacttcgaccttgtcgtcatcggcgccggacccggcgggtacgtggccgccatccgt
gcggcgcagctcggcctgaaggtcgcgatcgtcgagcgcgacaagctgggcggcatctgc
ctcaactggggctgcatcccgaccaaggcccttctgaagtcagcggaagcctttgaaacc
cttggacatctcgaggactacggcctgcgggccgagaaggtgagctttgacctcgacgcc
gtggtcgcccgctcccgcaaggtggcgggccagctgaacgccggcgtcgccttcctgatg
aagaagaacaagatcacggtcatcgagggggaggcgcggctggaggccggcgccccgtcg
ccggtcgtccgcgtggccctcaaggccgggggcgagcggatcctgaaggccgccaatgtc
atcctggccacgggcgcccgggcgcggaccctaccggacctcggcctggtccctgacggc
gagcgggtctggtcctatcgcgaggccatggtcccggaccgggtcccgacctccctcctg
gtcgtggggtctggcgccatcgggatcgaattcgccagcttctacaaggccctgggctca
gaagtgacggtcatcgaggccctgccgcgcatcctgccggtagaggatgaggaggtctcg
gcggcggcccagaaggccttcgaggcccgcgggatcgccttccgcaccggcgcctccgtc
cggcggctcgcgcccagcggcaagagcgtcgaactgaccgtcgaggccggcggcgtcacc
gaggtcctcaaggccgaggtcgccatcgtcgccgtgggcatcgtcggcaatgtggaaggc
ctggggctggaggccctcggcgtcacgatcgagaagacccacgtcgtcacggattcccac
ggcgccaccggcgtgccgggcctctgggccatcggcgacctggccggcccgccctggctg
gcgcacaaggccagccacgagggcgtgcactgcgtcgagcacatcgccggccagaagccc
tccggcctgaccgcccccatcccgggctgcacctacgcctcgccgcagatcgcctccgtg
gggctgacagaggcccaggcgaaggccaggggcctggaggtcaaggtcggccgttttccc
ttgcgcgccaatggcaaggccatcgcggcgggtcacacggagggcttcatcaagacggtg
ttcgacgccgcgacgggcgccctggtcggcgcccacatgatcggcgcggacgtgaccgag
atgatccagggctatgccctcgccatgaccctggaggccaccgaggccgacctcttcgcg
accgtcttcccgcacccgacgatcagcgagggcatgcacgaggcggcgctggacgccttc
ggctgggccctgcacacttga

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