Phenylobacterium parvum: HYN04_07740
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Entry
HYN04_07740 CDS
T05485
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
phb
Phenylobacterium parvum
Pathway
phb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
phb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HYN04_07740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phb03400
]
HYN04_07740
DNA repair and recombination proteins [BR:
phb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HYN04_07740
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HYN04_07740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
DnaJ_CXXCXGXG
AAA_21
AAA_25
RsgA_GTPase
ATPase
DUF4192
nSTAND1
BCA_ABC_TP_C
APS_kinase
DUF4350
CA109-like
Motif
Other DBs
NCBI-ProteinID:
AWM77661
UniProt:
A0A2Z3HWA1
LinkDB
All DBs
Position
1612974..1615871
Genome browser
AA seq
965 aa
AA seq
DB search
MSDDQNFIRVRGAREHNLKDVDIDIPRGQLVVLTGLSGSGKSSLAFDTIYAEGQRRYVES
LSAYARQFLELMSKPDVDLIEGLSPAISIEQKTTSRNPRSTVGTVTEIHDYMRLLWARVG
TPYSPATGLPIESQTVSQMVDKLSALPEGERLYLLAPVVRGRKGEYRKEIAEWQKAGFQR
LKIDGAFYPIEDAPVLDKKFKHDIDVVVDRLVTRGGLESRYADSLETALRLADGIAVAEW
ADSPEGEDEPRRLIFSEKFACPVSGFTISEIEPRLFSFNNPFGACPSCDGLGARLAFDAD
RVVPDRSRTLHGGAIAPWSKGPSPLYTQTLQALSRHYAFSMDAPWSDLPEAARKVVLHGS
AGEKILFVYDDNARKYEVNKTFEGVLPNLERRWRETDSAWVREELGRFQSETPCEACEGY
RLKPEALAVRIDARHIGEVSRMSIREAGAWFTSLEGRLTPKQMEIARRILKEINDRLRFL
VNVGLDYLNLSRASGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNTRLLDS
LRGLRDLGNSVLVVEHDEEAILTADHVIDMGPGAGIHGGHVVSQGRPAEIMADPASVTGR
YLSGAEEIPLPDRRRPVKGAKVLKVVGATGNNLQSVTAEIPVGTLTCITGVSGGGKSTFT
IETLYKAAARRLHNAADAPAPHDRIEGLQHFDKVIDIDQSPIGRTPRSNPATYTGAFQPI
RDWFAGLPEAKARGYGPGRFSFNVKGGRCEACQGDGLIKIEMHFLPDVYVTCDVCQGRRY
NRETLEILFKGKSISDVLDMTVDEAHDFFKAVPTVREKMATLKRVGLGYVKVGQQATTLS
GGEAQRVKLSKELSRRATGKTLYILDEPTTGLHFEDVRKLLEVLHELADAGNTVVVIEHN
LDVVKTADWILDFGPEGGDGGGRIVASGTPEAVAAEPASWTGRYLADILARHEDRRLARR
RAVMA
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgaccagaacttcatccgggtgcggggcgcccgcgagcacaacctgaaggac
gtcgacatcgacatcccgcggggccagctggtcgtgctgaccggcctgtcgggctcaggc
aagagctcgctggccttcgacaccatctatgccgaaggccagaggcgctatgtcgagagc
ctctcagcctatgcgcgccagttcctggagctgatgagcaagcccgacgtcgacctgatc
gagggcctgtcgcccgccatctccatcgaacagaagaccaccagccgcaatccgcgatcg
accgtgggcacggtgaccgaaatccacgactatatgcgcctgctctgggcccgggtcggc
acgccctactctcccgccaccggcctgcccatcgagagccagaccgtctcgcagatggtc
gacaagctgtcggcccttcccgagggcgagcggctctacctgctggcccccgtcgtccgc
ggccgcaagggcgagtaccgcaaggagatcgccgagtggcagaaggcgggttttcagcgc
ctcaagatcgacggcgccttctacccgatcgaggacgccccggtcctcgacaagaagttc
aagcacgacatcgacgtggtggtggaccgactggtcacccgcggcggccttgagagccgc
tacgccgactccctggaaaccgccctgcggctggccgacggcatcgccgtggccgagtgg
gccgacagtcccgagggcgaggatgagcctcggcgactgatcttctccgagaagttcgcc
tgcccggtctccggcttcaccatctccgagatcgaaccccggctcttctcgttcaacaat
ccttttggcgcctgcccgtcctgcgacggccttggcgcgcggctggccttcgacgccgac
cgggtcgtgcccgaccgcagccgcaccctgcacgggggcgccatcgccccctggtccaag
ggcccctcccccctctacacccagaccctccaagccctgtccaggcattatgccttctcg
atggatgcgccctggagcgaccttcccgaggccgcccgcaaggtggtcctgcatggctcg
gcgggcgagaagatcctgttcgtctacgacgacaatgcgcggaagtacgaggtcaacaag
accttcgagggggtcctgcccaacctcgagcgccgctggcgcgagaccgattccgcctgg
gtgcgcgaggagctgggccgcttccagtccgagacgccgtgcgaggcctgcgagggctat
cgtctcaagccggaggccctcgcggtgcggatcgacgcccggcacatcggcgaggtctcg
cgcatgtccatccgcgaggccggcgcctggttcaccagcctggaggggcggctgacgccc
aagcagatggagatcgcccgccggattctgaaggagatcaacgaccgcctccgcttcctg
gtgaatgtcggcctggactacctgaacctgtcccgggcctctggcacgctctcgggcggc
gagagccagcggatccggctggccagccagatcggctccggcctgaccggcgtgctctac
gtcctcgacgagccatccatcggcctgcaccagagagacaacacccgcctgctggacagc
ctgcgcggcctgcgcgacctcgggaactccgtgctggtggtcgaacacgacgaggaggcc
atccttaccgcggaccatgtcatcgacatgggacccggcgccgggatccatggcgggcac
gtggtcagccagggtcgcccggcggagatcatggccgatccggccagcgtcaccgggcgt
tacctgagcggcgccgaggaaattccgcttcctgaccggcggcgcccggtcaagggcgcc
aaggtcctgaaggtcgtgggcgccaccgggaacaacctccagtccgtcacggccgagatc
cccgtcggcaccctgacctgcatcaccggcgtttccggcggcggaaagtccaccttcacc
atcgagaccctctacaaggccgccgcccggcgcctgcacaacgccgccgacgcgccggcg
ccccatgaccggatcgaagggctgcagcacttcgacaaggtcatcgacatcgaccagtcg
cccatcggccgcacgccgcgctcgaacccggccacctacaccggcgccttccagcccatc
cgcgactggttcgccggcctgcccgaggccaaggcccggggctatggcccggggcgcttc
agcttcaacgtgaagggcggacggtgcgaggcctgccagggcgatggcctgatcaagatc
gagatgcacttcctgccggacgtctatgtcacctgcgacgtctgccagggccgccggtac
aaccgcgagaccctcgagatcctgttcaagggcaagtccatctccgacgtcctggacatg
acggttgacgaggcccacgacttcttcaaggccgtgcccacggtgcgggagaagatggcg
acgctaaaacgggtgggcctcggctacgtcaaggtcggccagcaggccaccaccctgtcg
ggcggcgaggcccagagggtcaagctgtccaaggaactgtcccgccgggccaccggcaag
accctctacatcctggacgaacccaccaccggcctgcacttcgaggacgtccggaagctg
ctggaggttctgcatgaactggccgacgccgggaacaccgtggttgtgatcgagcacaac
ctcgacgtcgtgaagacggcggactggatcctcgacttcggcccggaaggcggggatggc
ggcggccggatcgtcgcctcaggaacgcccgaggccgtcgccgccgagccggcaagctgg
acgggacgctatctggcggacattctggcgcggcatgaagacaggcgattggcccggcgt
cgcgcggtcatggcctga
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