KEGG   Phenylobacterium parvum: HYN04_07740
Entry
HYN04_07740       CDS       T05485                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
phb  Phenylobacterium parvum
Pathway
phb03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:phb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    HYN04_07740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:phb03400]
    HYN04_07740
DNA repair and recombination proteins [BR:phb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HYN04_07740
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      HYN04_07740
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_16 AAA_29 DnaJ_CXXCXGXG AAA_21 AAA_25 RsgA_GTPase ATPase DUF4192 nSTAND1 BCA_ABC_TP_C APS_kinase DUF4350 CA109-like
Other DBs
NCBI-ProteinID: AWM77661
UniProt: A0A2Z3HWA1
LinkDB
Position
1612974..1615871
AA seq 965 aa
MSDDQNFIRVRGAREHNLKDVDIDIPRGQLVVLTGLSGSGKSSLAFDTIYAEGQRRYVES
LSAYARQFLELMSKPDVDLIEGLSPAISIEQKTTSRNPRSTVGTVTEIHDYMRLLWARVG
TPYSPATGLPIESQTVSQMVDKLSALPEGERLYLLAPVVRGRKGEYRKEIAEWQKAGFQR
LKIDGAFYPIEDAPVLDKKFKHDIDVVVDRLVTRGGLESRYADSLETALRLADGIAVAEW
ADSPEGEDEPRRLIFSEKFACPVSGFTISEIEPRLFSFNNPFGACPSCDGLGARLAFDAD
RVVPDRSRTLHGGAIAPWSKGPSPLYTQTLQALSRHYAFSMDAPWSDLPEAARKVVLHGS
AGEKILFVYDDNARKYEVNKTFEGVLPNLERRWRETDSAWVREELGRFQSETPCEACEGY
RLKPEALAVRIDARHIGEVSRMSIREAGAWFTSLEGRLTPKQMEIARRILKEINDRLRFL
VNVGLDYLNLSRASGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNTRLLDS
LRGLRDLGNSVLVVEHDEEAILTADHVIDMGPGAGIHGGHVVSQGRPAEIMADPASVTGR
YLSGAEEIPLPDRRRPVKGAKVLKVVGATGNNLQSVTAEIPVGTLTCITGVSGGGKSTFT
IETLYKAAARRLHNAADAPAPHDRIEGLQHFDKVIDIDQSPIGRTPRSNPATYTGAFQPI
RDWFAGLPEAKARGYGPGRFSFNVKGGRCEACQGDGLIKIEMHFLPDVYVTCDVCQGRRY
NRETLEILFKGKSISDVLDMTVDEAHDFFKAVPTVREKMATLKRVGLGYVKVGQQATTLS
GGEAQRVKLSKELSRRATGKTLYILDEPTTGLHFEDVRKLLEVLHELADAGNTVVVIEHN
LDVVKTADWILDFGPEGGDGGGRIVASGTPEAVAAEPASWTGRYLADILARHEDRRLARR
RAVMA
NT seq 2898 nt   +upstreamnt  +downstreamnt
atgtccgacgaccagaacttcatccgggtgcggggcgcccgcgagcacaacctgaaggac
gtcgacatcgacatcccgcggggccagctggtcgtgctgaccggcctgtcgggctcaggc
aagagctcgctggccttcgacaccatctatgccgaaggccagaggcgctatgtcgagagc
ctctcagcctatgcgcgccagttcctggagctgatgagcaagcccgacgtcgacctgatc
gagggcctgtcgcccgccatctccatcgaacagaagaccaccagccgcaatccgcgatcg
accgtgggcacggtgaccgaaatccacgactatatgcgcctgctctgggcccgggtcggc
acgccctactctcccgccaccggcctgcccatcgagagccagaccgtctcgcagatggtc
gacaagctgtcggcccttcccgagggcgagcggctctacctgctggcccccgtcgtccgc
ggccgcaagggcgagtaccgcaaggagatcgccgagtggcagaaggcgggttttcagcgc
ctcaagatcgacggcgccttctacccgatcgaggacgccccggtcctcgacaagaagttc
aagcacgacatcgacgtggtggtggaccgactggtcacccgcggcggccttgagagccgc
tacgccgactccctggaaaccgccctgcggctggccgacggcatcgccgtggccgagtgg
gccgacagtcccgagggcgaggatgagcctcggcgactgatcttctccgagaagttcgcc
tgcccggtctccggcttcaccatctccgagatcgaaccccggctcttctcgttcaacaat
ccttttggcgcctgcccgtcctgcgacggccttggcgcgcggctggccttcgacgccgac
cgggtcgtgcccgaccgcagccgcaccctgcacgggggcgccatcgccccctggtccaag
ggcccctcccccctctacacccagaccctccaagccctgtccaggcattatgccttctcg
atggatgcgccctggagcgaccttcccgaggccgcccgcaaggtggtcctgcatggctcg
gcgggcgagaagatcctgttcgtctacgacgacaatgcgcggaagtacgaggtcaacaag
accttcgagggggtcctgcccaacctcgagcgccgctggcgcgagaccgattccgcctgg
gtgcgcgaggagctgggccgcttccagtccgagacgccgtgcgaggcctgcgagggctat
cgtctcaagccggaggccctcgcggtgcggatcgacgcccggcacatcggcgaggtctcg
cgcatgtccatccgcgaggccggcgcctggttcaccagcctggaggggcggctgacgccc
aagcagatggagatcgcccgccggattctgaaggagatcaacgaccgcctccgcttcctg
gtgaatgtcggcctggactacctgaacctgtcccgggcctctggcacgctctcgggcggc
gagagccagcggatccggctggccagccagatcggctccggcctgaccggcgtgctctac
gtcctcgacgagccatccatcggcctgcaccagagagacaacacccgcctgctggacagc
ctgcgcggcctgcgcgacctcgggaactccgtgctggtggtcgaacacgacgaggaggcc
atccttaccgcggaccatgtcatcgacatgggacccggcgccgggatccatggcgggcac
gtggtcagccagggtcgcccggcggagatcatggccgatccggccagcgtcaccgggcgt
tacctgagcggcgccgaggaaattccgcttcctgaccggcggcgcccggtcaagggcgcc
aaggtcctgaaggtcgtgggcgccaccgggaacaacctccagtccgtcacggccgagatc
cccgtcggcaccctgacctgcatcaccggcgtttccggcggcggaaagtccaccttcacc
atcgagaccctctacaaggccgccgcccggcgcctgcacaacgccgccgacgcgccggcg
ccccatgaccggatcgaagggctgcagcacttcgacaaggtcatcgacatcgaccagtcg
cccatcggccgcacgccgcgctcgaacccggccacctacaccggcgccttccagcccatc
cgcgactggttcgccggcctgcccgaggccaaggcccggggctatggcccggggcgcttc
agcttcaacgtgaagggcggacggtgcgaggcctgccagggcgatggcctgatcaagatc
gagatgcacttcctgccggacgtctatgtcacctgcgacgtctgccagggccgccggtac
aaccgcgagaccctcgagatcctgttcaagggcaagtccatctccgacgtcctggacatg
acggttgacgaggcccacgacttcttcaaggccgtgcccacggtgcgggagaagatggcg
acgctaaaacgggtgggcctcggctacgtcaaggtcggccagcaggccaccaccctgtcg
ggcggcgaggcccagagggtcaagctgtccaaggaactgtcccgccgggccaccggcaag
accctctacatcctggacgaacccaccaccggcctgcacttcgaggacgtccggaagctg
ctggaggttctgcatgaactggccgacgccgggaacaccgtggttgtgatcgagcacaac
ctcgacgtcgtgaagacggcggactggatcctcgacttcggcccggaaggcggggatggc
ggcggccggatcgtcgcctcaggaacgcccgaggccgtcgccgccgagccggcaagctgg
acgggacgctatctggcggacattctggcgcggcatgaagacaggcgattggcccggcgt
cgcgcggtcatggcctga

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