Phenylobacterium parvum: HYN04_07945
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Entry
HYN04_07945 CDS
T05485
Name
(GenBank) RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
phb
Phenylobacterium parvum
Brite
KEGG Orthology (KO) [BR:
phb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phb03009
]
HYN04_07945
Enzymes [BR:
phb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
HYN04_07945
Ribosome biogenesis [BR:
phb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HYN04_07945
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_31
MTS
PSD5
Motif
Other DBs
NCBI-ProteinID:
AWM77698
UniProt:
A0A2Z3I1N2
LinkDB
All DBs
Position
complement(1656571..1657800)
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AA seq
409 aa
AA seq
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MSMGGEGDGVIRLEDGGVLHVAGALPGETVRLRAGPEGFVLDEVLEPSASRRTPPCPHFG
ACGGCVLQHWDAESALAWKVERLRATLALERLETEILPVFWTSPGGRRRAALHARRGSSR
TEARIGFKARKSWNLVDIDGCAVLNPAIVRALPALRRLAAPLLEHPKSAPSLHVTMTDDG
LDIDVTGVEARSGGLSADARQEVAALAAETGLARLTLAGDILFQQRQPSLKIGRARVALP
AGAFLQADPAAEAAMVAEARSAVDGARRIADLFCGLGAFTFPLAEVAPVLAVDGSAPAIR
ALGAAVATAPGLHGITAEARDLFRRPLSAAELKRIDAVVFDPPRAGALAQVAEIAQSGAA
RVVGVSCNPATFARDARRLVDSGFRLERILPVDQFLWSSHLELVAVFSR
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgggcggggagggggatggtgtgatccgcctcgaggacggcggcgtcctgcat
gtggccggggccctgcccggggagacggtgcgcttgcgggccggtcccgaaggtttcgtc
ctcgacgaggttcttgagcccagcgcctcgcgccggactccgccctgtccgcatttcgga
gcctgcggcggctgcgtcctccagcactgggatgcggagtccgccctggcctggaaggtc
gagcgcctgagggccaccctcgccctggagcggctggagaccgagatcctgcccgtcttc
tggacctcgcccggcggacgtcgtcgggcggccctccacgcccggcggggatcctcccgc
accgaggcgcggattggcttcaaggcgcgcaagtcctggaacctggtcgacatcgacggg
tgtgcggtcctgaacccggccatcgttcgcgcccttccggccctgcggcggctggcggcg
ccgctgctggagcacccgaagtcggcgccctccctgcatgtgaccatgacggatgacggc
ctcgacatcgacgtgacgggcgtcgaggcgaggtccggcggcctgtcggcggacgcccgc
caggaggtcgcggcgcttgcggccgagaccggtctggcccgcctgaccctcgcgggagac
atcctgttccagcagcgccagcccagcctgaagatcggccgggcccgggtggccctgccg
gccggggccttccttcaggccgatcccgccgcggaggccgccatggtcgccgaggcaagg
tccgcggtcgatggcgcgcgccggatcgccgacctcttctgcggcctgggcgcctttacc
ttccccctcgcggaagtcgccccggtcctggccgtcgatgggtccgcccccgccatccgg
gccctgggcgccgccgtggccaccgcacccggcctgcacgggatcaccgccgaggctcga
gatcttttccggcgccccctttccgcggccgaactcaagcggatcgacgccgtcgtgttc
gacccgccccgcgccggcgccctggcgcaggtcgccgagatcgcccagtcgggggccgcc
cgcgtggtgggcgtctcgtgcaatcccgccacattcgcccgggacgcccggcggttggtc
gattcgggattccgcctggagcgcatccttccggtggaccagttcctctggtcatcgcac
ctcgaactcgtggcggtgttcagccgctga
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