KEGG   Phenylobacterium parvum: HYN04_08140
Entry
HYN04_08140       CDS       T05485                                 
Name
(GenBank) VirB4 family type IV secretion/conjugal transfer ATPase
  KO
K03199  type IV secretion system protein VirB4 [EC:7.4.2.8]
Organism
phb  Phenylobacterium parvum
Pathway
phb03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:phb00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HYN04_08140
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:phb02044]
    HYN04_08140
Enzymes [BR:phb01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     HYN04_08140
Secretion system [BR:phb02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   HYN04_08140
SSDB
Motif
Pfam: CagE_TrbE_VirB P-loop_TraG AAA_22 AAA_16 MerR_1 AAA_33 NPHP3_N ABC_tran
Other DBs
NCBI-ProteinID: AWM78784
UniProt: A0A2Z3I5I6
LinkDB
Position
complement(1701116..1703443)
AA seq 775 aa
MGDRLAFARHLDGQTLETRDGLLVQVLHIAGFPFETASDEDLNYRKSVRETVLRSAATSR
LALWHHVVRRRVTPDFPPPPEESFCADLDRKWREQLETRQLFVNDIFLTLVLRPTQGRAG
LVERILRGPRQRQSESARDLRELHALRDSFAAALAPYGARTLGVYDGAGGARFSEPCEFL
SLLLNGEARPVLAPSGDIASALGQRRLTFGLDALELGTGHGGERSFGAVVGLKDYPARTA
PGLLDGVLRLPHEMVLTESFAFQDRQASLERMGVALRRLKAADDDAFSLRGELAQARDDV
GAGRAVYGEHHLSILVKARELDELDYAVADVQSALAEAGVLAVREDANLEPSFWAQFPGG
FRFIARKGLISAANFASLASFHNHPTGQAEGNHWGPAISVLETTASGPYHFNFHQGDLGN
FTCIGPSGSGKTVLLTFLLAQAERVRPRVAYFDKDRGAEPFIRAIGGRYDVLRPGEPTGF
NPLLLPDEPGNRAFLAEWLAQLLSADGSTLSADDRAVIADALDANFAQPPSHRRLRFLRE
LFRGGRRPTPGDLAFRLGPWCEGGEHAWLFDNAEDQLSLETRVLGFDMTRVLDAPEVRTP
AMMYLFHRLEQRLDGTPAIFVVDEGWKVLDDPVFIRRIKDWEKTIRKRNGLVGFCTQSAS
DALDSRIASAIIEQAATQIFFPNPRARPEEYIDGFGLSEHEFSLVRSLPDTSRCFLVKRG
DHSIVARLDLSGLSGPLQVLAGTERSVRRLDQLRAVVGDAPTAWLEPFMAGKSAP
NT seq 2328 nt   +upstreamnt  +downstreamnt
attggcgaccgcctcgcctttgcccggcacctcgacggccagaccctggagacgcgggac
ggcctgctcgtccaggtcctgcacatcgccggcttccccttcgagaccgcctcggatgag
gacctgaactatcgcaagtccgtccgcgagaccgtccttcgaagcgccgcgacttcgcgc
ctcgccctctggcaccatgtggtccgccggcgtgtgacgccggactttccgccgccgccg
gaagaatccttctgcgctgacctcgaccggaagtggcgtgaacagctcgagacccgccaa
ctcttcgtcaacgacatcttcctgaccctggtcctgcgcccgacccagggccgggccggc
cttgtggagcggatcctccgggggccgcgccagcggcagtcggagtcggcgcgcgacctg
cgcgaacttcacgccctgagggactccttcgccgccgccctggccccctatggtgcgcgg
accctcggcgtctacgacggcgcgggcggcgcgcgcttttccgagccctgcgagtttctc
tccctgctcctgaacggagaggcgcggcccgtgctcgcgccttccggcgacatcgcctcg
gccctcggccagcgtcgcctgacctttggcctggacgccctggagctcgggaccggccat
ggcggcgagcgcagtttcggcgccgtcgtcgggctcaaggactatccggcgcgtacggcg
ccggggctgctcgacggcgtccttcgcctgccgcacgagatggtcctgaccgagagcttc
gccttccaggatcgccaggcttcgctggaacggatgggcgtggcccttcgacgcctgaag
gccgccgatgacgacgccttcagcctgcgtggggaacttgcccaggcccgtgacgacgtc
ggcgcggggcgcgcggtctatggcgagcaccacctgtcgatcctggtgaaggccagggag
ctggacgagctcgactatgcggtcgccgacgtccagtcggccctcgcggaagccggggtc
ctggccgtacgtgaggacgccaacctggagcccagcttctgggcccagttcccgggcggc
ttccgcttcatcgcccgcaagggcctgatctccgccgccaacttcgccagcctggccagc
ttccataatcatccgacggggcaggccgaaggcaatcactgggggccggcgatttccgtc
ctcgagaccaccgcctcgggcccctaccacttcaatttccatcagggcgaccttggcaac
ttcacctgcatcgggccctccggttcgggcaagacggtcctcctgaccttcctcctggcc
caggccgagcgggttcgccctcgtgtggcctatttcgacaaggaccgcggcgccgagcct
ttcatccgagccattggcgggcggtacgacgtgctgcggcccggcgagccgacgggcttc
aaccccctgctgctgccggacgagccgggcaaccgtgccttcctggccgaatggctcgcc
cagctgctctcggcggatggctcgaccctcagcgccgacgaccgggcggtgatcgccgac
gccctcgacgccaacttcgcccagcccccttcgcaccgtcgcctgcggttcctgcgcgag
ctgttccggggcggccggcggcccacacccggggatctcgccttccgtctcggcccctgg
tgcgagggtggcgagcacgcctggctgttcgacaatgccgaggaccagctcagcctcgag
acccgggtgctcggcttcgacatgacccgggtcctggacgcccctgaagtccgcaccccg
gccatgatgtacctgttccacaggctggagcagaggctggacggcacgcccgccatcttc
gtcgtcgacgagggctggaaggtcctggacgacccggtcttcatccgtcggatcaaggac
tgggaaaagacgatccggaagcgcaacggccttgtgggtttctgtacccagagcgcctca
gacgccctcgacagccggatcgcctcggcgatcatcgagcaggccgcgacccagatcttc
ttccccaatccgcgcgcccggcccgaggaatacatcgacggcttcggcctgtccgagcac
gagttctccctggtccggtcgctgccggacacctcgcgctgcttcctcgtcaagcgcggc
gaccacagcatcgtcgcccgtctcgacctgtccggcctgtccgggcccctgcaggtgctg
gccggaaccgagcggtccgtgcgccgactcgaccagctgcgggcggtggtgggcgatgcg
cccacggcctggctcgagcccttcatggccggaaagtccgccccatga

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