Phenylobacterium parvum: HYN04_08860
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Entry
HYN04_08860 CDS
T05485
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
phb
Phenylobacterium parvum
Pathway
phb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
phb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HYN04_08860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phb03400
]
HYN04_08860
Enzymes [BR:
phb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HYN04_08860
DNA repair and recombination proteins [BR:
phb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HYN04_08860
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AWM77864
UniProt:
A0A2Z3I320
LinkDB
All DBs
Position
1854245..1855048
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AA seq
267 aa
AA seq
DB search
MSRLSGPAVAESLLAFWAETGVDAALLEIPTDRIAEGQKPLAAPRPAPATPLRTAAPAAP
RPLALEAAREAAAACQDLEALAAAIEAFEGCPIRFEGAASRSVFSRGPADAPVVVVGEAP
GAEEDRLGRPFVGKAGKMLDRMLESIGLADRAFITNTVFWRPPGNRTPSPEEQVVCRPFV
EQAIRLVRPRMLLLVGAPATRCLLDQAEGINKLHGRWFEWRTAEGDLELPALPTFHPAFL
MRQPTAKAMAWSDLKLFAERLNRPARP
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcctgtcaggccccgccgtcgccgaaagcctgctcgccttctgggccgagacc
ggcgtcgacgccgccttgctggaaataccgacggatcgaatcgccgagggccagaaaccc
ctcgccgccccccgccccgctccggcgacgcccctgcgtactgcggccccggcggccccc
cgccccctggccctggaagccgcgcgggaagctgcggcggcctgccaggacctggaggcc
ctggccgccgccatcgaggccttcgagggctgcccaatccgcttcgaaggcgcagcgagc
cgttccgtcttctcccgcggaccggcggacgcccctgtggtggtggtcggagaggccccg
ggcgccgaggaagaccggctggggcggcccttcgtgggcaaggccggcaagatgctggac
aggatgctggagtccatcggcctcgcggaccgggccttcatcaccaacactgtcttctgg
cggccgcccgggaaccggaccccctcccccgaggaacaggtcgtctgtcgtccctttgtc
gagcaggccatccggctggtgcggccgcggatgctgcttctggtcggcgcaccggccacc
cgctgcctcctggaccaggccgagggcatcaacaagctgcacggccgctggttcgagtgg
cggacagcggaaggcgaccttgagctgccggccctgccgaccttccatcccgccttcctc
atgcggcagccgaccgcaaaggccatggcctggtcggacctgaagctgtttgccgagcgg
ctgaaccgtccggcgcggccctga
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