Phenylobacterium parvum: HYN04_09460
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Entry
HYN04_09460 CDS
T05485
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
phb
Phenylobacterium parvum
Pathway
phb02020
Two-component system
phb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
phb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HYN04_09460
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HYN04_09460
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
phb02022
]
HYN04_09460
02035 Bacterial motility proteins [BR:
phb02035
]
HYN04_09460
Two-component system [BR:
phb02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
HYN04_09460
Bacterial motility proteins [BR:
phb02035
]
Flagellar system
Flagellar assembly proteins
Others
HYN04_09460
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA_3
AAA_19
AAA_16
AAA
ATPase
HTH_Tnp_ISL3
nSTAND3
AAA_2
HTH_50
AAA_22
HTH_30
APS_kinase
AAA_PrkA
DUF2089
AAA_29
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AWM77964
UniProt:
A0A2Z3I3B1
LinkDB
All DBs
Position
1987368..1988735
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AA seq
455 aa
AA seq
DB search
MRLLVVGQLNGQLASAVKMAMTQGAKVSHVETIAAATHALRAGQGADLLLVDYSLDIAAL
IAANEAERIRAPVVACGVDPDARKAADAIRAGAKEFIPLPPDAEMIAAVLAAVSDDNRPM
IAEDAAMKAVISMAEQVAPSEASILITGESGSGKEIVARHVHLKSRRSGKPFISVNCAAI
PENLLESELFGHEKGAFTGALARRIGKFEEANGGTLLLDEISEMDARLQAKLLRAIQERE
IDRVGGSQPVKVDIRILATSNRDLVQAVREGTFREDLLYRLNVVNLRLPPLRDRPGDILP
MADFFVRKYAAANGLSAQPLSQEARRRLLAHRWPGNVRELENAMHRAVLLASGPEIDESA
IRLPDGQPLGPADPAVRTAQAAATAAEAVSRGFVGQTVAAMEQQLIIETLEHCLGNRTHA
ANILGISIRTLRNKLKEYSEAGVSVPAPQMGASAA
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgcgacttctggtcgttggacaactgaacgggcaactggcgtccgccgtgaagatggcg
atgacccagggggccaaggtcagccacgtggagacgatcgcggcggccacccacgccctc
cgcgccggccagggggcggacctgctgctggtcgactacagcctcgacatcgccgccctc
atcgccgcaaacgaggccgagcggatccgcgcgccggtcgtggcctgcggggtggacccg
gacgcccgcaaggcggccgacgccatccgggcgggcgccaaggaattcattccccttccg
ccggacgccgagatgatcgccgccgtgctggccgcggtctcggatgacaaccggccgatg
atcgccgaggacgcggcgatgaaggccgtcatcagcatggccgagcaggtggcgccttcc
gaggcctcgatcctgatcaccggggaaagcggttccggcaaggagatcgtcgcccgccat
gtgcacctgaagtcgcgccggagcggcaagcccttcatctcggtgaactgcgcggccatc
ccggagaacctcctcgaaagcgaactcttcggccacgagaagggcgccttcaccggcgcc
ctggcccggcggatcggcaagttcgaggaggccaacggcgggaccctgctgctggatgaa
atctccgagatggacgcgaggctgcaggccaagctcctgcgggccatccaggagcgcgag
atcgaccgcgtgggcggctcccagccggtgaaggtggacatccgcatcctggccacctcc
aaccgcgacctggtccaggcggtccgggaggggactttccgggaagacctgctctaccgg
ctgaacgtggtgaacctgaggctgccgccgctccgcgaccggcccggcgacatcctgccc
atggcggacttcttcgtccgcaagtacgccgccgccaatggcctgtcggcccagccgctc
tcgcaggaggcccgtcgccggctgctcgcccatcgctggcccggaaacgtgcgcgagctt
gagaacgccatgcacagggcggtccttctcgccagcgggccggagatcgatgagtccgcc
atccgcctgcccgatggccagcccctcggcccggcggacccggccgtccgcaccgcccag
gccgcagccacggctgcagaggccgtctcccggggctttgtcggccagacggttgctgcg
atggagcagcagctcatcatcgagacccttgaacactgcctcggcaaccggacccacgcc
gcgaacattctcggcatctcgatccgcaccctccgcaacaagctgaaggagtactccgag
gcgggcgtgagcgtgccggcgccccagatgggcgcgagcgcggcctga
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