Phenylobacterium parvum: HYN04_10170
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Entry
HYN04_10170 CDS
T05485
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
phb
Phenylobacterium parvum
Pathway
phb00521
Streptomycin biosynthesis
phb00523
Polyketide sugar unit biosynthesis
phb00525
Acarbose and validamycin biosynthesis
phb00541
Biosynthesis of various nucleotide sugars
phb01100
Metabolic pathways
phb01110
Biosynthesis of secondary metabolites
phb01250
Biosynthesis of nucleotide sugars
Module
phb_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
phb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HYN04_10170 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HYN04_10170 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
HYN04_10170 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HYN04_10170 (rfbB)
00525 Acarbose and validamycin biosynthesis
HYN04_10170 (rfbB)
Enzymes [BR:
phb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
HYN04_10170 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
adh_short
adh_short_C2
NdhO
Motif
Other DBs
NCBI-ProteinID:
AWM78088
UniProt:
A0A2Z3I2U9
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Position
2148062..2149114
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AA seq
350 aa
AA seq
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MKLIVTGGAGFIGSAVVRRAVGEGRQVVNLDALTYSASLDNVASVARSPGYVFEHADICD
AAAVAAIFERHQPDALMHLAAESHNDRAIDGPIDFVRTNVLGTAVLLEAARLYWSALPPG
RREAFRFHHVSTDEVFGALGEDGAFSEATPYDPNSPYSASKAGADHLVRAWGRTYGLPVV
ITNCANNYGPFQFPEKLIPTVVVRALEGKTIPVYGDGRQVRDWLHVDDHAEALLTVLDRG
RLGETYCIGGDSTRRNIEVVRMLCEALDRHAPANTPHADKITFVTDRPGHDFRYAIDASK
IRDELGWAPRTPVPQGLDETVRWYVENQAWWQAIRDRGFASERQGLSGGG
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcatcgtcaccggcggcgcaggattcatcgggtcggccgtggtccgcagggcc
gtcggcgaaggacggcaggtggtcaacctggacgccctcacctattccgccagcctcgac
aacgtcgcctccgtggcgcggtctcccggctatgtcttcgagcacgccgacatctgcgac
gccgccgcggtggccgccatcttcgagcgccaccagccggacgccctcatgcacctggcg
gccgagagccataacgaccgggccatcgacggccccatcgacttcgtgcgcaccaatgtc
ctggggaccgccgtcctgctggaggccgcgcgactctactggtccgccctgcccccgggc
cggcgcgaggccttccgtttccaccatgtctcgacggacgaggtcttcggcgccctgggc
gaggacggcgccttcagcgaggccacgccctacgaccccaactcgccctactccgcctcc
aaggccggcgccgaccatctggtgcgggcctggggccggacctacggcctgccggtggtg
atcaccaactgcgccaacaactacggccccttccagttcccggagaagctgatcccgacg
gtggtggtgcgggccctggagggcaagaccatccccgtctacggcgatggccggcaggtc
cgcgactggctgcacgtggacgaccacgccgaggccctgctcaccgttctggaccgcggc
cggctgggcgagacctactgcatcggcggcgactccacccgccgcaacatcgaggtcgta
cgcatgctctgcgaggccctggaccgccatgccccggccaacaccccgcacgccgacaag
atcaccttcgtcaccgaccggccgggccacgacttccgctacgccatcgacgcctcgaag
atccgcgacgagctgggctgggccccgcgcacgccggtcccccagggcctggacgagacc
gtgcgctggtacgtcgagaaccaggcctggtggcaggccatccgcgaccgcggcttcgcc
tccgaacgccagggcctgtcaggcggcgggtga
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