Phenylobacterium parvum: HYN04_11875
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Entry
HYN04_11875 CDS
T05485
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
phb
Phenylobacterium parvum
Pathway
phb00010
Glycolysis / Gluconeogenesis
phb00020
Citrate cycle (TCA cycle)
phb00260
Glycine, serine and threonine metabolism
phb00280
Valine, leucine and isoleucine degradation
phb00310
Lysine degradation
phb00380
Tryptophan metabolism
phb00620
Pyruvate metabolism
phb00630
Glyoxylate and dicarboxylate metabolism
phb00640
Propanoate metabolism
phb00670
One carbon pool by folate
phb00785
Lipoic acid metabolism
phb01100
Metabolic pathways
phb01110
Biosynthesis of secondary metabolites
phb01120
Microbial metabolism in diverse environments
phb01200
Carbon metabolism
phb01210
2-Oxocarboxylic acid metabolism
phb01240
Biosynthesis of cofactors
Module
phb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
phb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
phb_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
phb_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
phb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
HYN04_11875 (lpdA)
00020 Citrate cycle (TCA cycle)
HYN04_11875 (lpdA)
00620 Pyruvate metabolism
HYN04_11875 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
HYN04_11875 (lpdA)
00640 Propanoate metabolism
HYN04_11875 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HYN04_11875 (lpdA)
00280 Valine, leucine and isoleucine degradation
HYN04_11875 (lpdA)
00310 Lysine degradation
HYN04_11875 (lpdA)
00380 Tryptophan metabolism
HYN04_11875 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
HYN04_11875 (lpdA)
00670 One carbon pool by folate
HYN04_11875 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phb04147
]
HYN04_11875 (lpdA)
Enzymes [BR:
phb01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
HYN04_11875 (lpdA)
Exosome [BR:
phb04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
HYN04_11875 (lpdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
NAD_binding_8
GIDA
AlaDh_PNT_C
HI0933_like
FAD_binding_2
Thi4
DAO
Lys_Orn_oxgnase
Pyr_redox_3
FAD_binding_3
DUF7768
3HCDH_N
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AWM78384
UniProt:
A0A2Z3I4D4
LinkDB
All DBs
Position
complement(2540851..2542248)
Genome browser
AA seq
465 aa
AA seq
DB search
MSQFDVVIIGGGPGGYNAAIRAGQLGLKAAIVEMRDTLGGTCLNVGCMPSKALLHASELY
EAANREFEHLGIEVAPRLNLKQMMAQKDESVTALTKGVDFLMKKNKVERFLGKGRLAGPG
RVEVEGGDGKVVTLEAANIVLATGSEPSGLPGVKVDGDRIVDSTGALSLGEVPKTLVVIG
AGIIGLELGSVWRRLGAEVTVIEYLDRICPGMDAELAKAFQRTLAKQGVNFRLGAKVTGA
KAGKSKVDLAVEPAAGGAAETLSADRVLLAIGRRPYTAGLGLETVGLVPDARGFLETDHF
RTAAAGVWAVGDVIHGPMLAHKAEEDAVACIELIAGKAGHVDYNLVPSVVYTTPEVAWVG
RNEEQLKAEGRAYKAGKFPFAANSRAKINHETDGLVKVLADAATDEILGVHILGPQAGEL
IGEYCVAMAFRAASEDIARVCHPHPTRSEAGRQAAMGVEGWTMQA
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagttcgacgtcgtcatcatcgggggcggccccgggggctacaacgccgccatc
cgcgccggccagcttggcctgaaggccgccatcgtcgagatgcgcgacaccctgggcggc
acctgcctcaacgttggctgcatgccctccaaggccctcctgcacgcctccgagctctac
gaggcggcgaaccgggagttcgagcacctgggcatcgaggtcgccccgcgcctcaacctc
aagcagatgatggcccagaaggacgagtcggtgaccgccctgaccaagggcgtcgacttc
ctgatgaagaagaacaaggtcgagcgcttcctcggcaagggtcgcctggccggccctggc
cgggtcgaggtggagggcggggacggcaaggtcgtcaccctcgaggccgccaacatcgtc
ctcgccacaggctccgagccctcgggcctgccgggagtgaaggtggacggcgatcgcatc
gtcgattccaccggagccctgtccctgggcgaggtccccaagacccttgtcgtcatcggc
gccggcatcatcggcctggagctggggtcggtctggcgccggcttggggccgaggtcacg
gtcatcgagtacctggaccggatttgccccggcatggacgccgaactggccaaggccttc
cagcggaccctggccaagcagggcgtgaacttccgcctgggcgccaaggtgaccggcgcc
aaggccggcaagtccaaggtcgatctcgccgtcgagcccgccgccggcggcgccgccgag
accctttccgccgaccgggtcctcctggccatcggccggcgcccctacaccgccggcctc
ggccttgagacggtgggcctggttcccgacgcccggggcttcctggagaccgaccacttc
cgcacggccgcagctggggtctgggccgtcggcgacgtgatccacggccccatgctcgcc
cacaaggccgaggaggacgccgtcgcctgcatcgagctgatcgccggcaaggcgggccac
gtggactacaacctggtgcccagcgtggtctacaccacccccgaggtcgcctgggtcggc
cgcaatgaagagcagctgaaggccgagggccgcgcctacaaggccggcaagttccccttc
gccgccaatagccgggccaagatcaaccacgagaccgatggcctcgtgaaggtgctggcc
gacgccgccaccgacgagattctcggcgtgcacatcctggggccccaggcaggcgaactg
atcggcgaatactgcgtggccatggccttccgcgccgccagcgaggacatcgcccgcgtc
tgccacccgcacccgacgcgctccgaggccggccggcaggccgccatgggcgtcgagggc
tggaccatgcaggcctga
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