Planococcus halocryophilus: BBI08_00195
Help
Entry
BBI08_00195 CDS
T04473
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
phc
Planococcus halocryophilus
Brite
KEGG Orthology (KO) [BR:
phc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phc03009
]
BBI08_00195
Enzymes [BR:
phc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
BBI08_00195
Ribosome biogenesis [BR:
phc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BBI08_00195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
TRM5-TYW2_MTfase
Methyltransf_25
MTS
PrmA
Methyltransf_15
Cons_hypoth95
Methyltransf_11
RrnaAD
TPMT
Motif
Other DBs
NCBI-ProteinID:
ANU12388
UniProt:
A0A1C7DLZ2
LinkDB
All DBs
Position
930182..931543
Genome browser
AA seq
453 aa
AA seq
DB search
MKPVNKNDRITVHVEDLTHDGAGVAKVDGYPLFVPGALPGEDVVVHVLKTLKSYGFAKLI
EIQQASPFRVTAPCPVFDTCGGCQIQHLSYEGQMTFKQKLVRDAITRIGKLPDVPVHPVK
GMEDPWRYRNKSQIPFGTQNGKVVAGFYQPRSHDIADTDTCLIQTPEADAIMVALKKNLI
DMGIEPYEEATHRGMLRHVVVRKARATGEIMVVLVTKKKKFPQAQRAIELIQATVPEVTS
IVQNINPEKTNVIFGDETLTLWGKDVIEDRIGDVRFEISARSFYQINPVQTEVLYGQALA
YAQLTGEETVIDAYCGIGTISLFLAQRAKFVMGVEIVPQAIEDAKRNAELNGLTNTLFEA
GPAEQVIPRWYKEGKKADVLVVDPPRKGCDEQLLHTILKQRPTRVVYVSCNPATLARDLR
ILEDGGYRTKEVQPVDMFPQSTHCEAVAWLELV
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaccagtaaataaaaatgaccgaatcacggttcatgtagaagatttgacgcacgac
ggagcgggtgtcgcaaaagttgacggctacccactatttgtacctggcgcattgcctgga
gaagatgttgtggttcatgtgttaaaaacgttaaaatcatatggctttgcaaagcttatt
gaaatacaacaagcttcgccttttcgtgttacagctccttgtcctgtttttgatacatgt
ggaggctgtcagattcagcacttgtcctacgaagggcaaatgacctttaaacagaaattg
gtgcgcgatgccattacacgtattggtaagttgccagatgtacctgtgcatccagttaaa
ggcatggaagatccgtggcgctaccgcaataaatcccaaattccttttggcactcaaaat
ggcaaagtggttgctggattttatcagccacgttcgcatgatatcgcagacaccgatacg
tgtttaattcaaacgcctgaagcagatgcaattatggtcgcgttaaaaaagaacttgatc
gacatgggcattgaaccgtacgaagaagcaacacatcgcggcatgcttcgccatgttgtt
gttcgtaaggctcgagcgacgggagaaatcatggttgtgttagtgacgaagaaaaagaaa
ttccctcaagcacaacgtgccattgaattaattcaagcaactgtgccagaagtgacttcg
attgtccaaaacattaatcctgaaaagaccaacgttatttttggcgacgaaaccttgacg
ctttggggcaaagatgtgattgaagatcgaattggggatgttcgttttgaaatttcagca
cgctcgttttatcaaattaaccctgtacaaacagaagtgctttatggccaagcgctagcg
tatgcacagttaacgggggaggaaactgtcatcgatgcgtattgtggcattggaaccatc
tcattattccttgcgcaacgagctaaatttgtcatgggagttgaaattgtaccgcaagca
attgaagatgctaagcgcaacgctgagttaaatggcttaacgaatacgttgtttgaagca
ggacctgctgaacaagtgattccgcgctggtataaagaaggaaagaaggcggatgtctta
gtcgtcgatccaccgcgtaaaggttgtgacgagcagttattacacacaatactaaaacaa
cgtccaacacgcgttgtttacgtgtcatgtaacccagcaacactcgcacgcgatttacgc
atactagaagatggcggttaccgtacgaaagaagtgcaacctgttgatatgttccctcag
tcaactcattgtgaagcagtggcatggttagaattggtttaa
DBGET
integrated database retrieval system
