Planococcus halocryophilus: BBI08_02230
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Entry
BBI08_02230 CDS
T04473
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
phc
Planococcus halocryophilus
Pathway
phc03030
DNA replication
phc03430
Mismatch repair
phc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBI08_02230
03430 Mismatch repair
BBI08_02230
03440 Homologous recombination
BBI08_02230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phc03032
]
BBI08_02230
03400 DNA repair and recombination proteins [BR:
phc03400
]
BBI08_02230
Enzymes [BR:
phc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBI08_02230
DNA replication proteins [BR:
phc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BBI08_02230
DNA repair and recombination proteins [BR:
phc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BBI08_02230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ANU12723
UniProt:
A0A1C7DNC9
LinkDB
All DBs
Position
1300557..1303619
Genome browser
AA seq
1020 aa
AA seq
DB search
MSMVYPHISTSADLLKSTVRLDELFPFLKEQGATSVAIVNTKLYGILPFWEACRRADIHG
VIGLSVFIEYEEQHFPVVLYAQTNKGYDNLLKISSALSTRDKEAIPEQWLKAYREGLICI
IPNKAEWLMTDRSLVVEYIKNLFGKAAFGSVERPGGVVSPYESAFIELCEKIEIPIIASH
EIRYMHQQDAFAYEVASAIGQGVKMNDPERQKPEHTNAYVPSQQEFLSWFEDRNEWIQQT
ADVLKSCGVTIPMNRQLLPVYPLSEQMDKATYIAQLCKVGLEERVPDFSKKYQERLNYEL
SIIAKMGFIDYFLIVADFMKYAKDQDIMTGPGRGSSASSLVAYSLKITDVDPIEHGLLFE
RFLNPERITLPDIDIDFADHRRHEVVEYVAQKYGAVRTAQIITFGTLSAKAVARDTARVF
GFEAEELEAISKLISNRPGTTLRSALKESTKFNDWIIEREERKSWFKTALKLEGLPRHAS
THAAGVILSPTPLVNHVPIEKGHEGIYLTQWPMQELEAIGLLKMDFLGLRNLTILEQIRS
LIYWDTKKRFHYSSIPLEDAKTFKLLATGDTTGVFQLESDGMRHALQQIQPTAFGDIVAV
NALYRPGPMEFIPLYARRKHGQETVKYVHPILEPILRETYGVIVYQEQIMHIAAKMAGFS
LGEADLLRRAVSKKKREILDEEREHFVQGAKAKGFTEAEAAEVYDLIVRFADYGFPKSHA
VAYSMISYQLSYMKAHYPVYFYTSLLTNSAGNAEKTKQLMQEIKEKKIPLLPPSVQKSRH
TFSVEDGQIRFGLNAVKGVPGSTIKALLTAREEGPFKSLFNIAERISALHFNRKSFEPLI
KAGALDEFGHDRGVVLASLDSAIKHAELVKPNDEPGLFDDMGASFMKPKYTKASEMPESL
KLEFEKEVLGFYLSKHPIEREKENRQKSYDALKSLKSKRDRELVKVLGVIEDIKRIRTKK
GDAMAFLTLMDETGPASVTLFPVEYAKFNLLLEPHATLEIQGLVENRNHKTAIICKNIET
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatggtttatccgcatataagcacatcggctgatttgctgaagagcacggtgcgc
cttgacgaacttttcccgtttttaaaggaacaaggagctacttcagtcgcaatcgtcaat
acaaaattatatggcattcttccgttttgggaggcatgccgccgcgccgacatccatggg
gtgatcggcctttcggtttttatcgagtatgaagagcagcattttccggttgtgttatat
gctcaaacaaacaaagggtatgacaatttgttgaaaatttcgagcgcattatctactcga
gataaagaagcaattcctgagcaatggctaaaagcgtatagagaaggtttaatatgtata
attccaaacaaagcagaatggctcatgaccgatcgcagtttagttgtagagtacataaag
aatttatttggcaaagcagcgtttggcagcgttgaacgtccgggcggcgtagtgtctcca
tacgaatccgcatttattgagctttgtgaaaaaatcgaaattccaatcattgcttcacat
gaaatccgctatatgcatcaacaagatgcttttgcttatgaagttgcatcggcgattggt
caaggtgtcaaaatgaatgatccagaaagacagaaaccggaacatacgaatgcttacgtt
ccgagtcaacaagagtttttgtcttggtttgaagatcgaaacgaatggattcaacaaacc
gcagacgtgttaaaaagctgtggagtaactataccaatgaatcggcagttgttaccggtc
tatccgttatcagaacaaatggataaagcaacttatattgcgcaattatgtaaagtggga
cttgaagaacgagtaccagacttttcaaaaaaatatcaagagcggctaaattacgaatta
tcgattatcgcgaaaatgggttttatcgattatttcttaattgttgcggattttatgaaa
tacgccaaagatcaagacatcatgacaggccctggacggggatcgtcagcgagttcgctt
gttgcttattcattgaaaattacagatgtcgatcctatcgaacatggtttgctgtttgag
cgtttcttgaatccagagcgtattacgctgccggatatcgatatcgattttgctgatcat
agacgccatgaagtagtagagtatgtggcacaaaaatacggagctgttcgaaccgcacaa
atcataacatttggaacattatctgcaaaagcagttgcacgagatactgcgcgtgtattt
ggttttgaagcagaagaacttgaagctatttcaaaactaatttcaaatcgtcccggcaca
actttgcgttcagctttaaaagagtctacaaagtttaatgactggatcatcgaacgtgag
gaacgcaaatcttggtttaagaccgcgttaaaattagaaggtttaccacgacacgcttct
acccacgcagcaggtgtaattttaagtccaaccccactagtcaatcatgtgccaattgaa
aaaggacatgaaggcatttatttgacacaatggccaatgcaggaactcgaagcgattggc
ttattgaagatggattttctgggacttcgcaatttaacaattttagaacaaattcgcagt
ttgatttattgggatacgaaaaagaggttccactacagcagcattccgctagaagatgca
aaaacctttaaattactggcaacaggagacacaactggtgtttttcagctggaatccgat
ggcatgcgtcatgcgcttcaacaaatccagccgacagcatttggcgatattgttgcagtt
aacgcgttataccgaccaggtccaatggaatttatccctttgtatgcaagacgaaaacac
ggtcaagaaacggtgaaatacgttcatccgattttagaaccgattttacgtgaaacttac
ggtgttattgtttatcaagagcaaattatgcatattgccgcgaaaatggcaggattttct
cttggtgaagctgacttattacgtcgcgctgtcagcaagaaaaaacgtgaaattttggat
gaagaacgcgaacattttgtgcaaggtgcgaaagcaaaagggtttactgaagcagaagca
gccgaagtttatgatttaatcgttcgttttgccgattatggatttccgaaaagtcatgcg
gtagcttatagcatgatttcctaccaattgagttatatgaaagcccattatcccgtttat
ttttatacaagtttattgacaaatagtgctggtaatgccgaaaaaacaaagcaattgatg
caggaaatcaaggaaaagaaaattcctttacttcctccatctgtgcaaaaaagtcgtcac
acgttttcagtagaagacggtcaaattcgattcggattaaatgccgtgaaaggtgttccg
ggttcaaccatcaaagctttgcttaccgctcgtgaagaaggtccatttaaaagtttgttt
aatattgctgaacgaatatcggctttgcattttaaccggaaatcgtttgaacctcttata
aaagcaggtgctcttgatgaatttgggcatgatcgtggtgttgttttggcatcattagat
agcgccattaaacacgctgagctggtaaaaccaaatgacgagccaggcttgtttgatgac
atgggagcgagctttatgaaacccaaatatacaaaagcttcagagatgcccgaaagtttg
aagcttgaatttgaaaaagaagtgctgggtttttatttgtctaaacatccgattgaacga
gaaaaagaaaatcgacaaaaatcatatgatgcacttaaatcattaaagtcgaaacgtgat
agagaactggtaaaggtattaggggtgatagaggatataaaacgaattcgtacaaaaaaa
ggagatgctatggcatttctaaccttaatggatgaaacaggtccagcttctgttacgttg
tttccggtggaatacgcaaaattcaacttacttttggaacctcatgcgacacttgaaatt
caaggattagttgaaaatcgaaatcacaaaaccgcaattatttgcaaaaatatagaaacc
tga
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