Planococcus halocryophilus: BBI08_02310
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Entry
BBI08_02310 CDS
T04473
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
phc
Planococcus halocryophilus
Pathway
phc03030
DNA replication
phc03410
Base excision repair
phc03420
Nucleotide excision repair
phc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBI08_02310
03410 Base excision repair
BBI08_02310
03420 Nucleotide excision repair
BBI08_02310
03440 Homologous recombination
BBI08_02310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phc03032
]
BBI08_02310
03400 DNA repair and recombination proteins [BR:
phc03400
]
BBI08_02310
Enzymes [BR:
phc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBI08_02310
DNA replication proteins [BR:
phc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BBI08_02310
DNA repair and recombination proteins [BR:
phc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BBI08_02310
NER (nucleotide excision repair)
GGR (global genome repair) factors
BBI08_02310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
ANU12739
UniProt:
A0A1C7DMD0
LinkDB
All DBs
Position
1319476..1322112
Genome browser
AA seq
878 aa
AA seq
DB search
MEGVIFVAKKILLLDGNSLAYRAFFALPLLTNENGIHTNAVYGFTMMLQKILGEEQPTHM
IVAFDAGKTTFRHKTFSEYKGGRQKTPPELSEQFPYLRKLIDAYGIKRYELENYEADDII
GTLSLEAEREGDEVVVISGDKDLTQLASPTTTVYITRKGITDIEKYTVEHIKEKYGLTPL
QIIDMKGLMGDASDNIPGVPGVGEKTALKLLAAHGSVEGVYEAIEQQKGKMKEKLIANED
LAYISKQLATIERQAPIKIQIDELTYSGPDQDELVKVWKELAFKSLLEKMEYTAEETVKE
ELEFELLTTIDSSILKDEMAVHLELYDDHYHSCDLLGVSLATKTDTYVIPMSVVEQSEEF
RAWFKDPSKKKFMADSKAATAAFLRFGIVLKGVDFDLMLGAYIVNPSLTYTDMASIVQEY
GHNDVSTNEQVYGKGAKKKVPEDAVLHEHIARKARTIWKVRPLIMEKLEENEQFDLYDKL
ELPLATVLGQMESLGVMVNREQLVDMGKELSHKLEKIESNIHGLAGQEFNINSPKQLGVI
LFEKLGLPPLKKTKTGYSTAADVLEKLEGQHEIISHILMYRQLGKLLSTYIEGLLKEIHE
DGKIHTRFQQALTTTGRLSSINPNLQNIPVRLEEGRKIRKAFVPSEPGWVMVAADYSQIE
LRVLADMSEDERLVQAFKDDRDIHTTTASDVFHVAEEEVTSDMRRAAKAVNFGIVYGISD
YGLSQNLNIPRKEAAAFIERYFTSFPGVKSYMTNIVSDAKRDGFVTTLMNRRRYLPDITS
SNFNLRSFAERTAMNTPIQGSAADIIKKAMIDMDAALEREGLQARMLLQVHDELIFEAPP
EELDQLMKLVPEVMENAVKLNVPLKVDIAHGSTWYDTK
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggaaggggtaatttttgtggcaaagaaaatacttttattagatgggaatagtttggcg
tatcgcgcatttttcgctttaccgctattaaccaatgaaaatggcattcatacgaatgct
gtatacggatttaccatgatgcttcaaaaaatactcggtgaagaacaacctacacatatg
attgtggcttttgatgcgggaaaaacgacattccgccataaaacgtttagcgaatacaaa
ggcggaagacaaaaaacgccacctgaattatcggaacaatttccttatcttcgcaaattg
atcgatgcatatgggattaagcgctacgaattagaaaattacgaagcagacgatattatc
ggtacattaagtttagaagctgaacgagaaggcgacgaagttgtcgttatttctggagat
aaagatttaacacaattggcatcacccacaacgacggtttacattacgcgaaaaggcata
acggatatcgaaaaatatacagtagagcatataaaagaaaagtatggtttaacgcctctt
caaattatcgatatgaaaggtcttatgggcgatgcttcggataatattccaggtgtacca
ggtgttggagagaaaacagcgctgaaattattagcagcacacggttcggtcgaaggtgta
tatgaagctatcgaacaacaaaaaggcaagatgaaggaaaaactaattgccaatgaagac
cttgcttatattagtaagcaattagcaacaattgaacgacaagcaccaattaaaattcaa
atcgatgaattgacttattccgggccggaccaagacgagttggttaaagtatggaaagaa
ctagcgtttaaatctttactagaaaaaatggaatacacagcagaagaaacggtgaaagaa
gagttggaatttgaattactgacaacaatcgattcatctatattaaaagatgaaatggca
gttcatcttgaactttacgatgatcattatcatagttgtgatttgctgggggtttcactc
gcgactaaaacggatacttacgttattccgatgagcgttgttgagcagtcagaagagttt
cgtgcatggtttaaagatccatcaaagaaaaaattcatggcagattctaaagcagcaacg
gcagcatttttacgctttggtattgtactaaaaggcgtggatttcgatttaatgttagga
gcttatatcgtcaatccatccttaacgtataccgatatggcgagcattgttcaagagtat
ggtcataacgatgtttcgacgaatgaacaagtttacggcaaaggagctaaaaagaaagtt
ccagaagacgctgttttacatgagcatattgctagaaaagcccgcaccatttggaaagtc
cgtccactcattatggaaaaactcgaagaaaacgagcaatttgatttgtatgataaatta
gaattgccactcgccacagttttagggcaaatggaatctcttggtgtaatggtaaaccgc
gagcaattagtcgatatgggcaaagagttgtctcataagctagagaaaatcgagtcaaat
attcatggactagctggtcaagaatttaatattaattctccaaagcagttaggtgttata
ttatttgaaaaactaggattaccgcctttaaagaagacgaagaccggctattcgacagca
gcggatgttctagaaaaattagaaggtcaacacgaaattatttctcatatattgatgtat
cgccaattaggtaaactattgtctacttatattgaaggtttattaaaagaaattcatgaa
gatggaaaaattcatacgcgcttccaacaagcactcacgacaactgggcgattaagttca
atcaaccctaacttgcaaaacattccagttcgtcttgaagaaggacgtaaaattcgcaaa
gctttcgtaccgtcagaaccgggctgggtaatggtagcagcagattattctcaaattgaa
ttgcgcgtgctcgccgatatgtctgaagatgaacgattagtacaagcttttaaagacgac
cgtgatattcacacgacaactgcgagcgatgttttccacgtagctgaagaagaagtaacg
agtgacatgcgccgagcggctaaagcggttaacttcggaattgtttatgggattagcgat
tatggcttgtctcaaaatttaaatattccacgtaaagaagcagctgcttttattgaacgt
tattttactagcttcccaggcgtcaaaagctatatgacgaacattgtgtctgatgctaag
cgtgacggatttgttacaactttgatgaatcgtcgccgttatttaccagacattacaagt
tcaaactttaatttaagaagctttgcagaacgcacggcgatgaatacaccaattcaaggc
agtgcggcagatattatcaaaaaagccatgattgatatggatgcagcgttagagcgtgaa
ggattgcaagctcgcatgcttttacaagttcacgatgaattgatctttgaagcgccacct
gaagagttagatcaattgatgaaattagtacctgaagttatggaaaatgcagtgaagttg
aatgttcccttaaaagtggatatcgctcacggttcaacttggtacgatactaaatga
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