Planococcus halocryophilus: BBI08_03195
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Entry
BBI08_03195 CDS
T04473
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
phc
Planococcus halocryophilus
Brite
KEGG Orthology (KO) [BR:
phc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phc03019
]
BBI08_03195
03009 Ribosome biogenesis [BR:
phc03009
]
BBI08_03195
Enzymes [BR:
phc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BBI08_03195
Messenger RNA biogenesis [BR:
phc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BBI08_03195
Ribosome biogenesis [BR:
phc03009
]
Prokaryotic type
rRNA helicases
BBI08_03195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
ANU12910
UniProt:
A0A1C7DMT9
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All DBs
Position
1498817..1500112
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AA seq
431 aa
AA seq
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MTKFNEYPFKPFLLEAVEKLGFTEPTQIQKEMMPHILKGTSAIGQSHTGTGKTHSFIIPI
VERIDVSKQEVQAVISAPTRELGTQIFNELQKLVVGSGIEVKSFIGGTDKQRSINKLKTQ
PHIVVGTPGRLRDLVKENALLVHTGKILVIDEADLAFDLGFIEEIDQVAGKMKDDLEMYV
FSATIPEKLKPFLKKYMESPVHVKIGDKRPTADGLDFYLVPVRSKKKMDRLQDVMKAINP
YLAIIFVNTRTNADYVADQLAKEGIRVGRVHGDLAPRERVKMMRQIRDLEYQYIVATDLA
ARGIDIQGVSHVINYELPEDLEFFIHRVGRTARAGMKGLAITLFKPEEEDAIVRIEKMGI
PFQQKDIVKGEFVDLKERHSRTTRTRKVNEADAKAKTMVHKPKKVRPMYKKKMKWKMDEI
KKMERRKNRKK
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatttaacgaatatccattcaaaccgtttctattagaagcggtagaaaaactt
ggttttacggaaccgacacagattcaaaaggaaatgatgccccatatattgaaaggcaca
agtgcaattggacaatcccacacagggactggaaaaacgcatagtttcattattccaatt
gtagaacgtattgacgtcagcaaacaggaagtgcaggcggtaatttcagcaccgacacgt
gaacttggaacgcagatcttcaatgagttgcaaaagctagttgtaggatcgggcattgaa
gtaaaatcgtttatcggtggtacagacaagcaacgttcaattaacaaactaaaaacacag
ccccatatcgtagtcggaacgcctggtcgattaagagacttggtgaaagaaaacgctttg
ttggtgcatacaggtaaaattctagtaattgatgaagcggatttagcttttgatcttggc
tttatcgaagaaattgaccaagtagcggggaaaatgaaagacgatctagaaatgtatgtc
ttttcagcgacaattcctgaaaaattaaaaccattcttgaaaaaatacatggaatcacca
gttcatgtaaaaattggcgacaaacgtccaactgcagatggtttagacttttacttagtg
ccagttcgtagcaaaaagaaaatggatcgcttgcaggacgtgatgaaagcgatcaatcct
tatttagccatcattttcgttaacacgcgtacaaatgcggattatgtcgcagaccaatta
gcaaaagaaggcattcgtgttggacgtgtccacggcgatttagcaccacgtgaacgcgtt
aaaatgatgcgtcaaattcgtgacttggaatatcaatacatcgtagcaacagatcttgca
gctcgtggaattgatattcaaggcgttagccatgttatcaactacgaattaccggaagac
ctggaattcttcattcaccgtgtaggccgtacagctcgcgctggaatgaaaggattagcg
attacgttattcaagccagaagaagaagatgcaattgtccgtattgagaaaatgggcatt
cctttccaacaaaaagatattgttaaaggcgaatttgtcgacttgaaagagcgtcatagc
cggacaacacgtacaagaaaagtgaacgaagcagacgcgaaagcgaaaacaatggttcac
aagccgaaaaaagtaagaccaatgtacaagaagaagatgaagtggaaaatggacgaaatt
aagaaaatggaacgacgcaaaaatcgtaaaaaataa
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