Planococcus halocryophilus: BBI08_06310
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Entry
BBI08_06310 CDS
T04473
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K24072
positive control factor
Organism
phc
Planococcus halocryophilus
Brite
KEGG Orthology (KO) [BR:
phc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phc03021
]
BBI08_06310
Transcription machinery [BR:
phc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BBI08_06310
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
HTH_23
GerE
HTH_24
HTH_29
HTH_40
UPF0122
HTH_11
Terminase_5
HTH_10
HTH_28
DUF6362
Sigma70_ECF
KcnmB2_inactiv
HTH_38
HTH_36
HTH_3
TetR_N
Motif
Other DBs
NCBI-ProteinID:
ANU13478
UniProt:
A0A1C7DQ54
LinkDB
All DBs
Position
complement(2106876..2107364)
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AA seq
162 aa
AA seq
DB search
MTVWADELLHEYGIHKKDLERRRDRIDRTDFHQKQDLTQINSMIESMTFSMDWMEIGRQP
GTYKGADKRNIYQRQSFASMDFIPDITVQLEEGPKQLYMTAEEKIILADIFAALSFRERQ
CFILHEASGLSMGKIADEVGLKRRTVQQYIERAREKIKIKVG
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtttgggcagatgagctattacacgagtacggtattcacaagaaagacctggag
cgtcgtcgtgaccggattgatcgcaccgacttccatcagaaacaggatcttacacagatc
aacagcatgattgaaagcatgaccttctcaatggattggatggagattgggagacagccc
gggacgtataagggtgcagacaagcggaacatttatcagcggcaatcctttgcaagtatg
gactttattcctgacattaccgtgcagttagaggaaggtccaaagcaactgtatatgaca
gctgaagagaagattattcttgcagatatttttgctgctttatcgttccgtgaaagacaa
tgtttcattttgcatgaagctagtggtttaagcatgggcaaaattgcagatgaagtgggt
ttaaaaagaaggacagtacaacaatacatcgaaagagcgcgcgagaaaataaaaatcaaa
gtaggatga
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integrated database retrieval system