KEGG   Planococcus halocryophilus: BBI08_06310
Entry
BBI08_06310       CDS       T04473                                 
Name
(GenBank) RNA polymerase subunit sigma-70
  KO
K24072  positive control factor
Organism
phc  Planococcus halocryophilus
Brite
KEGG Orthology (KO) [BR:phc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:phc03021]
    BBI08_06310
Transcription machinery [BR:phc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BBI08_06310
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 HTH_23 GerE HTH_24 HTH_29 HTH_40 UPF0122 HTH_11 Terminase_5 HTH_10 HTH_28 DUF6362 Sigma70_ECF KcnmB2_inactiv HTH_38 HTH_36 HTH_3 TetR_N
Other DBs
NCBI-ProteinID: ANU13478
UniProt: A0A1C7DQ54
LinkDB
Position
complement(2106876..2107364)
AA seq 162 aa
MTVWADELLHEYGIHKKDLERRRDRIDRTDFHQKQDLTQINSMIESMTFSMDWMEIGRQP
GTYKGADKRNIYQRQSFASMDFIPDITVQLEEGPKQLYMTAEEKIILADIFAALSFRERQ
CFILHEASGLSMGKIADEVGLKRRTVQQYIERAREKIKIKVG
NT seq 489 nt   +upstreamnt  +downstreamnt
atgaccgtttgggcagatgagctattacacgagtacggtattcacaagaaagacctggag
cgtcgtcgtgaccggattgatcgcaccgacttccatcagaaacaggatcttacacagatc
aacagcatgattgaaagcatgaccttctcaatggattggatggagattgggagacagccc
gggacgtataagggtgcagacaagcggaacatttatcagcggcaatcctttgcaagtatg
gactttattcctgacattaccgtgcagttagaggaaggtccaaagcaactgtatatgaca
gctgaagagaagattattcttgcagatatttttgctgctttatcgttccgtgaaagacaa
tgtttcattttgcatgaagctagtggtttaagcatgggcaaaattgcagatgaagtgggt
ttaaaaagaaggacagtacaacaatacatcgaaagagcgcgcgagaaaataaaaatcaaa
gtaggatga

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