Planococcus halocryophilus: BBI08_07575
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Entry
BBI08_07575 CDS
T04473
Name
(GenBank) RNA polymerase sigma-I factor
KO
K03093
RNA polymerase sigma-I factor
Organism
phc
Planococcus halocryophilus
Brite
KEGG Orthology (KO) [BR:
phc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phc03021
]
BBI08_07575
Transcription machinery [BR:
phc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BBI08_07575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_ECF
HTH_11
Motif
Other DBs
NCBI-ProteinID:
ANU13717
UniProt:
A0A1C7DQM8
LinkDB
All DBs
Position
complement(2353301..2354047)
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AA seq
248 aa
AA seq
DB search
MLLASLGWKFGRIEKSDAETMVLQVQAGDEQVLHDLLSHYSPFMKKTASQVCKRFIDDHD
DEYSVALSAFNEAIHKFDQQKNASFLTFAHMVIRRRVIDFIRKESRRDEFSHDFMPATET
EEHNGIADHAATIAYSSEQENQKRGEEIARYEEILQEFDLSFQLLVKVSPLHSDARITAI
QIAQLVAETDEYKQYLLDKKKLPIKEIEKHVKVSRKTIERNRKYIIAMALLQMSDLYFLK
DYLKGRLN
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
gtgcttttagcttcattaggctggaaatttggacgtatcgagaaatctgatgctgaaaca
atggtattgcaggtacaagctggcgacgagcaggtattacacgatttactttctcattat
tcaccttttatgaaaaagacagcatcgcaagtatgcaagcggtttatcgatgatcatgac
gatgaatatagcgttgccctatctgccttcaatgaagctatccataaattcgaccaacaa
aaaaatgcatcgtttttaacatttgcacatatggttattcgtagacgcgttatcgatttt
atccgtaaagaaagcaggcgtgatgaatttagccatgattttatgccagcaacagagaca
gaagagcataatggcatcgcagaccatgccgcgactattgcttatagtagtgagcaagaa
aatcaaaaaagaggcgaggagatagcacggtatgaagaaattttacaggaatttgatttg
tcgtttcaactactagtaaaagtttctccactgcattcggacgcacgtatcacagcgatt
caaatcgctcagttagtagcggaaacagatgagtataaacaatatttattagacaagaaa
aaattaccgattaaagaaattgaaaagcatgtaaaggtatcgcgtaaaacaattgaacgt
aatcgaaagtacataattgcaatggctttattgcagatgagtgatttgtatttcttaaaa
gactatttgaaagggcggttaaactga
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