Planococcus halocryophilus: BBI08_07890
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Entry
BBI08_07890 CDS
T04473
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
phc
Planococcus halocryophilus
Brite
KEGG Orthology (KO) [BR:
phc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phc03400
]
BBI08_07890
Enzymes [BR:
phc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BBI08_07890
DNA repair and recombination proteins [BR:
phc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BBI08_07890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
ANU13776
UniProt:
A0A1C7DQI0
LinkDB
All DBs
Position
complement(2423921..2427397)
Genome browser
AA seq
1158 aa
AA seq
DB search
MSLRIVYGRAGAGKTRFVQEEIVDELKRQADGDPIFLIVPDQMSFSTEYRLAAAYNMNGM
IRAQAVTFKRLAWRVLQEVGGISRREVDTFGYRMLIRSLLEDHREDFQLFRRAAGKKGFT
DQIEQLVKEFARYCVDCGELNAIRSSLVEAGAPKTLLEKAEDLELILTEIESRLGKVFVD
SEGHLALLSEKIPHSDLVKSSTIYIDGFVTFTAREYEILFELMKHAKSVTIALPMDEQTD
PNDEQTLFYQSANTARRLTEQAAKEGIDIDNSVHLALPRRFVNPELEHIERHFDDFPTQK
TQGEGNVSLVEASNRRAEMHAVARAIRDQVRNGFRYNEIAILYRQPEIYDELIHTIFPQY
EIPYFISQKKSMLHHPLIEFSRSVLESMVSNYSYESIFRAVKTDLFFPQGPVTKWRERSD
VLENFVIANGIYGKRWFDEKRWFYKKYRGLEFHTSIQTDEELAAQVELHAVRDLVREPLA
QLKEQLKLSKTGRDIAESLFLFIEKMEVYAKIQDLREREESEHRLLAATEHEQAWNQWVG
VLDQFVLMFGDKEIDLQTAVKILDEGFETLEFSRIPPSLDQVMVSKIDLARLMDIKSVFV
VGANDGVLPKRIEQEGLLTDTDREWFAQIGFELAPTSKMRLMDETYMVYRAFTSASDLLT
VSFPIADEEGKALLPSLYIQKLKDMLSIDTFPAVIDPEELVDASPMAYISHPRASLAYLT
SQIRSGELSAEWRAVYNFYEDDPFWSSIIKRILSPIKPNKADPLRDAIAEPLYGTPISSS
VSRVETYYGCPFAHYVAYGLRLEERSQYKLAAPAMGDLFHAAIKWISDEVLRLGVSWSSL
TQKQCQNLAKEAIEQLSPYFVNHILMSSHRYRYIQHKLEGIIRQTAYMLSKHAKVSGFVP
IALEVGFGPKETIPPLEISLDRGRKMNVRGRIDRIDSTDIHGKPYLRIVDYKSSKQGLDL
SNVYHGLSLQTFTYLDVALTHSERWLGEEAEPAGVLYFHMHNPMLKLTKLLTAEELDEEM
AKSFKMNGLVVEDPEVIEAMDNQIDGYSNVIPVRLNKSGAVSASQSKTLMKEDMQVVRRF
VRNKHQNAGNGILEGDTSITPYKMKEDTPCQFCSYRSVCQFDPADPDQSYRKLTALSPDK
AVELIRKETAADDTEKTN
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
gtgtcattacgcattgtttatggcagagctggagcggggaaaactcgttttgttcaagaa
gaaatagtggatgagttaaaacgacaggcagatggtgatccgatatttcttattgtaccg
gatcaaatgtcattttctaccgaatatcgattagctgctgcatacaatatgaatggcatg
atacgtgcgcaagcggtgacgtttaagcgattggcttggcgtgtgcttcaagaagtagga
ggcattagcaggagggaagtagatacttttggctaccgtatgctaattcgtagcttgctg
gaagatcatcgagaggattttcaattgtttcgaagagctgcgggaaaaaaagggtttact
gatcaaatcgaacaattagtgaaagaatttgctcgttattgtgtagattgcggagaatta
aacgccatccgttcgtcattagttgaagcgggtgcaccaaaaacattactcgaaaaagca
gaagatctcgagttaatccttactgaaattgaaagtcgtctaggaaaagtatttgtagat
tctgaaggtcatctagccttattaagtgagaaaataccacattctgatttggtgaaatcg
tcgactatttacatcgatggatttgtcacctttacagctagagagtatgaaattcttttt
gaattaatgaagcatgctaaatcagtaacgattgcattacctatggatgaacaaactgat
ccaaatgatgaacaaaccttattctaccagtctgctaatacagcccgtagattaactgaa
caagcggcgaaagagggaatcgacattgataattcggttcacttagctttgccacgccgt
tttgtgaaccctgaactagaacatattgaacgtcactttgatgacttcccaacacaaaaa
actcaaggagagggcaatgtctctttagttgaagcatcaaatagaagagctgaaatgcat
gcggtagcacgcgcgattagagaccaagtgagaaatggttttcgttacaatgaaatcgcc
attctttacagacaacctgaaatttatgatgaactgatccatacaattttcccgcaatat
gaaatcccttattttatcagccaaaaaaaatcgatgcttcatcatcctttgattgaattt
agtcgttcagtacttgaatcgatggtctcgaattattcttacgaatcgatttttcgtgct
gtcaaaaccgatttgttctttccacaaggacctgtaacaaaatggcgagaaagaagtgat
gtactagagaacttcgtcatcgctaatggtatatacggaaagcgttggtttgatgaaaaa
cgctggttttataaaaaataccgcggtttggaatttcacacatccatacaaacagacgaa
gagctagcggcgcaagtagagcttcatgcagtacgtgacttagtaagagaacctttagct
cagttaaaagaacaattaaaactgagtaaaacaggacgagatatagcggaatctttgttt
ctttttatagaaaaaatggaagtctatgcaaaaattcaagatttacgagaacgcgaagaa
agtgagcatcgcctactcgctgcaacggaacacgagcaagcatggaatcagtgggtgggt
gtgttagatcaatttgtattaatgtttggcgataaagaaattgatttgcaaacagctgta
aagatattagacgaaggttttgaaacgttagagttttcgcgtatacccccatcactagat
caagttatggtatcaaaaatcgatttagcacgtttaatggatattaagtcggtcttcgtt
gtcggagcgaatgacggtgttttgccgaagcgtatcgagcaagaaggactgttaacagat
acagatcgtgaatggtttgctcaaattggctttgagctggctccaacatcgaaaatgcgc
ttaatggatgagacttatatggtgtatcgtgcctttacatctgcttctgatttattgacc
gtctcgtttccaatcgcagatgaagaaggaaaagcattattgccatctctttatattcaa
aaactaaaggatatgttgtcaattgatacctttcctgcagtcattgaccctgaagagctt
gtagatgcttctcctatggcgtatatttcgcatccacgagcgagtttggcctatttaact
tcacaaatacgcagtggtgaattatcagccgaatggcgtgcagtttacaatttttacgaa
gatgacccgttttggtcttctattattaaacgtattttatcgcctattaaaccaaataaa
gcagatcctcttcgtgatgctattgcggaacctttgtatggaacacccatttcttctagt
gtatcgagggttgaaacttattacggctgtccgtttgcgcattatgtggcttatgggtta
cgtctcgaagaaagaagtcaatacaaattagcagcacctgcaatgggggaccttttccat
gcagcgataaaatggatatcagatgaagtgcttcggcttggcgtatcgtggtcttcactg
acacaaaaacaatgccaaaacttagcaaaagaagcgattgaacagctgtctccttatttt
gttaatcatatattaatgagctcacatcgctatcgttatatccagcataaattagaaggt
attattcgccaaacagcctatatgctcagcaaacacgctaaagtttcgggatttgtaccg
attgcattagaagtagggtttggaccaaaagaaacgattccacctcttgaaatttcttta
gatcgtggacgtaagatgaacgttcgaggtcggattgatcgaatcgattctactgacatt
cacggtaaaccttatttgcgtatcgtcgattacaaatcatctaaacaaggtctcgacctg
agcaacgtttatcatggtttatctttacaaacctttacttacttagatgttgccctaact
cattctgaacgttggctgggagaagaagcagaaccggctggtgtgctttattttcatatg
cacaatccgatgttaaagctaacaaaattgctgacagctgaagaactagatgaagaaatg
gccaaatcctttaagatgaatggcttagtcgttgaagatcctgaagtgattgaagcaatg
gataaccaaattgatggatattccaatgtaattccagtacgactcaacaaaagcggagca
gtgtctgcatctcaatcaaaaacgttgatgaaagaagacatgcaagttgtccgccgtttt
gtccgcaataagcatcaaaacgcaggcaatggcatattagaaggcgatacgagtatcacg
ccatataaaatgaaagaagacacaccttgtcaattttgttcttatcgttcggtttgccaa
tttgacccagcagatcctgaccaaagttaccggaaattgactgctttatctcctgataaa
gcagtggaattgatcagaaaggagacagctgcagatgataccgaaaaaaccaattga
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