Planococcus halocryophilus: BBI08_15145
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Entry
BBI08_15145 CDS
T04473
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
phc
Planococcus halocryophilus
Pathway
phc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBI08_15145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phc03019
]
BBI08_15145
03009 Ribosome biogenesis [BR:
phc03009
]
BBI08_15145
Enzymes [BR:
phc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BBI08_15145
Messenger RNA biogenesis [BR:
phc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BBI08_15145
Ribosome biogenesis [BR:
phc03009
]
Prokaryotic type
rRNA helicases
BBI08_15145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
GRP
Helicase_RecD
NDK
Motif
Other DBs
NCBI-ProteinID:
ANU15559
UniProt:
A0A1C7DVE2
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All DBs
Position
509993..511456
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AA seq
487 aa
AA seq
DB search
MGFEEATPIQEGTIRLGMEGKDIIGQAQTGTGKTTAFGIPLIEKIDTKNGDVQGLIIAPT
RELAIQVSEELYRLGQDKNVRILSVYGGQEISRQIRALKNRPQIIVGTPGRLLDHINRRT
LKLDNVNTLILDEADEMLNMGFIEDIQTIMASVPDTRQTLLFSATMPDAIRRIAEKFMKT
PEIVKIKSKEMTVENIEQFYVKSVEREKFDFLSRLLNVQQPELAIVFGRTKRRVDELAKA
LNIRGYLAEGIHGDLSQAKRMSVLKQFKAGKIDILVATDVAARGLDISGVSHVYNFDIPQ
DPESYVHRIGRTGRAGKKGVAVTFVTPREMSYLAIVERTTKKKMEALVPPTANEAVLGQK
RVAMEQLLEMTEKNNLGDYREFATQMLDKHDAVDLIAAALKTMTKEPEDIPVSISEERPL
PSRGGGGYKGKSGGGGRSSGGGGYKGNRSSGSARPSSSRGASSGASRRREGGSGGGRPGR
TTRRSES
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggggtttgaagaagcaacaccaattcaagagggaacaattcgtcttggtatggaaggt
aaagacatcattggacaagcgcaaactggtactggtaaaactacagctttcggtattcct
ttgattgaaaaaattgacactaaaaacggtgacgttcaaggattaatcatcgctccaaca
cgcgaattggcaatccaagtttcagaagaactttacagactgggtcaagataaaaacgta
cgtattctttcagtatacggtggccaagaaattagccgacaaatccgtgcactaaaaaat
cgtccgcaaattatcgttggtacgccaggccgtctattagaccatatcaaccgccgtact
cttaaattggataatgtaaacacattgatccttgatgaagcagacgaaatgttgaacatg
ggctttatcgaagacattcaaacaatcatggcaagtgttcctgacacgcgtcaaacattg
ttgttctcagcaactatgccggatgcaatccgccgtattgcagagaaattcatgaaaacg
ccagaaatcgttaaaatcaaatcaaaagaaatgactgttgaaaacattgagcagttctac
gtaaaatctgtagagcgcgagaaatttgatttcctttcacgtcttttgaatgttcaacaa
ccggaacttgcgatcgttttcggacgtacaaaacgccgtgttgacgaattagcaaaagct
ttaaatatccgcggctaccttgctgaaggtattcatggtgacttaagccaagcaaaacgt
atgtcagttttaaaacaatttaaagccggcaaaatcgatattttagttgcaacagacgta
gcagctcgtggacttgatatctcaggcgtatcacacgtatacaactttgatattccacaa
gatcctgaaagctatgttcaccgtatcggccgtactggtcgtgcaggtaaaaaaggagtc
gcagtcacgtttgtaacaccacgtgaaatgagctacttagctatcgttgaacgtacaact
aagaaaaaaatggaagcattggttcctccaactgcgaacgaagctgtacttggccaaaaa
cgcgttgctatggaacaattgcttgaaatgacagagaaaaacaatcttggcgattatcgc
gaattcgcgacgcaaatgcttgataagcatgatgcggttgacttgattgcagcagctctt
aaaacaatgactaaagaaccggaagatattccagtttctatttccgaagaacgtcctttg
ccatcacgcggaggcggcggatataaaggtaaaagcggcggaggcggacgcagtagcgga
ggcggcggttacaaaggtaaccgttcatcaggttcagctcgtccatcatcaagccgtgga
gcaagctcaggcgcaagccgacgtcgtgaaggcggaagcggcggcggacgtccaggacgt
acgactcgtcgtagcgaatcttaa
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