Planococcus halocryophilus: BBI08_15215
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Entry
BBI08_15215 CDS
T04473
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
phc
Planococcus halocryophilus
Brite
KEGG Orthology (KO) [BR:
phc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phc03021
]
BBI08_15215
Transcription machinery [BR:
phc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BBI08_15215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_37
HTH_23
DUF1492
DUF134
GerE
HTH_3
HNF-1_N
Sigma70_ECF
KORA
Packaging_FI
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ANU15121
UniProt:
A0A1C7DV22
LinkDB
All DBs
Position
520167..520949
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AA seq
260 aa
AA seq
DB search
MSKQSHPNQPTKEQVLDWIEAYQKTEDEEAQTNLVLNYKRLVESIARKYSNGKSYHEDIA
QVGMLGLLGAIKRYDPTYGRSFEAFAVPTIIGEIKRFLRDKTWAIHVPRRIKELGPRIKA
TVEVLTTELQRSPQVWEIAEYLDVEEDDILEAMEMGKSYQALSMDHSLEADSDGSTITLF
DVVGQEDDGYEKADQRMLVAEAMNVLSEREKQIIQFTYIEQLSQKEAGDKLGISQMHVSR
LQRKAIKKLQEAILAAGGVS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacagtctcatcctaatcagcctactaaagaacaggtgcttgattggattgaa
gcttatcaaaaaacagaagatgaagaagcccagacaaacttggtgttaaattataaacgc
cttgtagaatccattgcacgaaaatattcaaatggaaaatcttatcatgaagatattgcg
caagtagggatgctggggctgttaggagctattaaacgctatgaccctacatatggtcgt
agttttgaagcctttgctgttcctacaattatcggtgagattaaacggttcttgcgtgat
aaaacatgggcgattcatgtcccgcgccgtataaaagaattgggtcctcggataaaagcg
acagttgaagtgttgacaacagagcttcaacgttcaccgcaagtgtgggaaatcgctgaa
tatctagacgttgaagaagacgatatattggaagcaatggagatgggcaaaagctatcaa
gcactttcaatggatcattctttagaggcagattcagatggcagtacaattactttattt
gacgtagttggccaagaagacgatggttatgagaaagcggatcagcggatgcttgtagct
gaagcgatgaatgtgctttctgaacgagaaaagcagatcatccaattcacctacatagag
cagctgagccaaaaagaagccggggataaactcgggatttctcaaatgcacgtttctcgt
ttgcaaagaaaagcgattaagaaacttcaagaagcaatattagcagctggcggagtttcc
tag
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integrated database retrieval system
