Pedobacter heparinus: Phep_0120
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Entry
Phep_0120 CDS
T00978
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
phe
Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phe02000
]
Phep_0120
Transporters [BR:
phe02000
]
Other transporters
Pores ion channels [TC:
1
]
Phep_0120
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
CarbopepD_reg_2
CarboxypepD_reg
Plug
SpaA
SdrD_B
NOMO_3rd
NOMO1-like_2nd
PEGA
Big_3_5
EMC7_beta-sandw
Motif
Other DBs
NCBI-ProteinID:
ACU02346
UniProt:
C6XY79
LinkDB
All DBs
Position
complement(142533..145034)
Genome browser
AA seq
833 aa
AA seq
DB search
MENYLKSSKLKRSIIAVFTVLMLPLLSMAQFSISGTVSEKSNQVLPGASVRLKNKGTGLT
SDAHGQYRFNNLKAGNYVLIVSYIGYRSTEKAVSLNADAVVDITLAPAAFLADEVIVRAT
RANEKSATTYKNIGKKEIEENNFGQDLPFILNNTPGVVVTSDAGAGVGYTGIRIRGSDAS
RVNVTVNGIPYNDSESQGTFWVNMPDFASSVDNIQIQRGVGTSTNGAGAFGGSVNIQTAS
VADQAYAELNNAYGSFNTLKNTVKVGTGMIDNKWSFDGRLSRIKSDGFIDRAASDLKSYF
LSGAYYGKKDLLRINVFSGQEKTYQAWNGVPEAKLRGDLVALEEHYNNNLGYLYYTDADR
ANLFNSNNRTYNQFTYKDQNDNYTQSHYQALYARQLNEKFSFNGALHYTDGAGYFEEYKN
DQKFSKYGLPDVSVGGSPISKTNLVRRRWLDNDFYGLTYAFNYVPSSNLNITLGGAYNQY
RGKHFGQIIWAQYASTAANDYHYYDGKGNKDDFNTYAKVNYSPVSQLSLFADLQYRNVNY
DITGLDKNRNTLDFHNKYNFFNPKVGATYFINQQSNVYASFSVGNKEPNRDDFSNLKAGL
PVPKSEHLNNVEAGYRITDKDFNVGINVYGMFYKDQLIFTGEVNDGGDPYRQNVDKSSRM
GLEIDGSYSISPKFIINANAALSRNKIKNYIDYVSVYDANFDLINVQATSYANPDISFSP
NTVLFGELVYKPLSGFAMALQSKYVSKQYMDNTQNESRKLDAYWVNNARLGYDFNLKGIK
NINIGLLINNILDKKYESNGYTYSSIYPWGMLTENFYFPQAGTNFLLSLNLKF
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggaaaattatttaaaatcaagcaaattgaaaagatcaattatcgcagtgttcactgtg
ctgatgctgccattgctatcaatggcacagttcagcatttcgggaactgtatccgaaaaa
tcaaaccaggtactaccgggcgcttctgtaaggctcaaaaacaaagggacaggccttact
tccgatgcccatgggcagtaccgttttaacaacctgaaagcagggaattatgtgcttatt
gtaagttatattggttaccggagtacagaaaaggcagtcagtttaaatgcagatgcagta
gtagacataacattggcccccgctgccttccttgcggatgaagtaattgtaagggccacg
cgggccaatgaaaaatcggccaccacctataaaaacatcggtaaaaaagaaattgaagaa
aacaactttggccaggacctgccttttatactgaacaatacaccgggtgtagtggtcact
tcggatgcaggtgcaggtgtgggctataccggcatcaggataaggggcagcgatgccagc
agggtaaatgtgaccgtaaatggtattccctataacgacagcgaaagtcagggtaccttt
tgggtaaacatgccagattttgcttcttcggtagacaatatacagatccagcgcggagtg
ggtacctctaccaatggggccggtgcttttggtggcagtgtaaatatacaaacggcatct
gttgccgatcaggcttatgccgaactgaacaacgcttatggctcatttaatactttaaaa
aataccgttaaggttggaacagggatgatcgacaacaaatggagctttgacgggcgttta
tccaggataaaatcggatggttttatagaccgggcggcttccgacctgaaatcatacttt
ttgtcgggcgcctattacggtaaaaaagacctgttgcgcatcaatgtattttcgggacag
gaaaaaacctaccaggcctggaacggtgttcccgaagcaaaattaaggggagacctggta
gccctggaagagcactacaacaacaacctgggttatctgtattatacagatgccgatcgt
gcaaacctgttcaattccaacaacagaacttataaccagtttacttataaagaccagaac
gacaattatacccaaagccattaccaggctttatatgccaggcagttgaacgaaaaattt
tcgtttaacggggccctgcactataccgatggcgccggttattttgaagaatataagaac
gaccagaagtttagcaagtatggtttgccggatgtaagtgttggtggtagccccatcagc
aaaaccaacctggttcgtcgccgctggctggacaatgacttttacggccttacctacgcg
ttcaattacgtcccctcgtccaacttaaacattaccttaggtggtgcgtataatcaatac
cgaggtaaacactttggccagatcatctgggcccaatatgcttcaactgctgcaaatgat
tatcattactatgatggaaaaggaaataaagatgattttaacacctatgctaaggtgaat
tattctcctgtaagccagctcagcttatttgctgatcttcagtatagaaatgtaaattac
gacattaccggccttgataaaaatcgcaacacccttgatttccataataaatacaatttt
ttcaatcctaaagttggtgccacttattttataaatcaacaaagtaacgtttacgcatcc
tttagtgtggggaacaaagaaccaaaccgcgacgacttcagcaatcttaaggcagggctg
cccgttccaaaatcagaacatttaaataatgttgaagcaggctaccgcattacagacaaa
gactttaatgtgggcatcaatgtttatggaatgttctataaagaccagcttattttcact
ggagaggtgaatgatggaggagacccttaccgacagaatgtagataaaagttcccgcatg
ggacttgaaatagatggatcctatagcattagtccaaagtttatcatcaatgccaatgcg
gccttaagccggaacaagatcaaaaattacatagattacgtttcagtatatgatgccaat
tttgacctgatcaatgtacaggctaccagctatgccaatcctgatatttccttctcaccc
aacaccgtattgttcggagagctggtttacaagccgcttagtggctttgcaatggccctg
caaagcaaatatgtaagcaaacagtacatggacaatacacagaatgaaagccgtaaactg
gatgcctactgggtaaacaatgccaggctgggctatgattttaatttaaaggggataaaa
aatatcaatatcggcttgctgatcaacaatatcctggataaaaaatatgagagcaatggc
tatacctatagctccatttatccatggggcatgctaacagaaaacttttatttccctcag
gccggaacaaatttcttactttcgctgaacctgaaattttaa
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