Pedobacter heparinus: Phep_0129
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Entry
Phep_0129 CDS
T00978
Name
(GenBank) helix-hairpin-helix motif protein
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
phe
Pedobacter heparinus
Pathway
phe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Phep_0129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phe03400
]
Phep_0129
Enzymes [BR:
phe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
Phep_0129
DNA repair and recombination proteins [BR:
phe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Phep_0129
Prokaryotic type
Phep_0129
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
ACU02355
UniProt:
C6XY88
LinkDB
All DBs
Position
154802..155851
Genome browser
AA seq
349 aa
AA seq
DB search
MSFQSEIVNWYLNHKRDLPWRGTTDAYIIWLSEVILQQTRVDQGLPYFNNFLQNYPTVLD
FASASETQVLKLWQGLGYYSRGRNMLFTARQVRDLHGGVFPVRYDQLIKLKGIGEYTAAA
IASFSSNESKAVLDGNVFRVLSRYFGIESPINSSTGKKQFADLAQSLISGQQPSVYNQAI
MEFGALQCKPKSPNCGICPVQDSCFAQKHHLVGTLPVKLNKLKKRTRYFNYFLCMEGDNI
LVKKRSPGDIWQELYDFPLIETDRPFLEDPEKFAPLLQESFGAACKVRTLSHQKHLLTHQ
TIYVQFFGLDNYIINFNQNAEIKWVSLPEFDELPQPKVITNFVCKHFIT
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgagttttcaatccgaaatcgtaaactggtacttaaaccataaaagggacctaccctgg
cggggtactacagatgcatacatcatctggttatccgaagtgatcctgcagcaaacccgg
gtagaccagggcctgccctatttcaataattttttacagaactatccaactgtgctcgac
tttgccagcgccagtgaaacacaggtgcttaaactatggcaggggcttggctattattcc
agaggcaggaacatgctttttacagccaggcaggtgcgcgacctgcatggtggcgttttt
ccggtgcgctatgatcagctcattaaactaaaagggattggcgagtataccgccgctgcc
attgcttctttttcttcaaatgaatcaaaagcagtgctcgatggcaatgtgttccgtgta
ttgtcccgttatttcggtatagaaagccccataaacagcagcaccggtaaaaaacagttc
gcagacctggcccagtcactcatcagtggccagcagccttcagtatacaatcaggccatt
atggagttcggcgcattgcagtgcaaacccaaatctcccaattgtggtatatgtccggtt
caggacagctgttttgctcaaaagcatcatctggtcggtacgcttcctgtaaaattgaac
aaactgaaaaaacgtacccgctatttcaactatttcctgtgtatggaaggcgacaatatc
ctggtcaaaaaaaggagccctggcgatatatggcaggaattatatgattttccactcatc
gaaacagaccggccttttctggaagatcccgaaaagtttgcccctttgttacaggaaagc
tttggcgcagcttgtaaagtcaggactttatcccatcaaaaacatttattaacacaccaa
actatatatgttcaattttttggtttagataattatatcattaactttaatcagaatgca
gaaataaaatgggtctcattgccggaattcgacgaattgccgcaacctaaagtgatcacc
aattttgtttgtaagcattttattacatag
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