Pedobacter heparinus: Phep_0211
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Entry
Phep_0211 CDS
T00978
Name
(GenBank) succinate dehydrogenase or fumarate reductase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
phe
Pedobacter heparinus
Pathway
phe00020
Citrate cycle (TCA cycle)
phe00190
Oxidative phosphorylation
phe00650
Butanoate metabolism
phe00720
Other carbon fixation pathways
phe01100
Metabolic pathways
phe01110
Biosynthesis of secondary metabolites
phe01120
Microbial metabolism in diverse environments
phe01200
Carbon metabolism
Module
phe_M00009
Citrate cycle (TCA cycle, Krebs cycle)
phe_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Phep_0211
00650 Butanoate metabolism
Phep_0211
09102 Energy metabolism
00190 Oxidative phosphorylation
Phep_0211
00720 Other carbon fixation pathways
Phep_0211
Enzymes [BR:
phe01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Phep_0211
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
HI0933_like
Pyr_redox_2
NAD_binding_8
GIDA
Pyr_redox
AlaDh_PNT_C
FAD_binding_3
FAD_oxidored
PALP
Thi4
Motif
Other DBs
NCBI-ProteinID:
ACU02437
UniProt:
C6XYH0
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All DBs
Position
247508..249487
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AA seq
659 aa
AA seq
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MSDLNSNIPEGELTTKWTKYKSSVPLVNPSNKRTIEVIIVGSGLAGASAAATLAEMGYKV
KCFCFQDSPRRAHSIAAQGGINAAKNYQNDGDSVYRLFYDTIKGGDYRAREANVHRLAEV
SANIIDQCVAQGVPLAREYGGLLDNRSFGGTQVQRTFYAAGQTGQQLLLGAYSALERQIG
MGKVEMFTRHEMLEVVKIDGKARGIIARNLITGEIERHFGHAVVLGTGGYGNVFYLSTNA
MGSNVTAAWKAHKQGAYFANPCYTQIHPTCIPVSGDHQSKLTLMSESLRNDGRIWVPKKK
DDLRKASEIPEDERDYYLERRYPAFGNLVPRDVASRAAKERCDAGYGVGASKLAVYLDFK
ANTERYGRIEAAKAGNHNPDKETCMRLGTEVIKAKYGNLFDMYAQITGENPYETPMRIYP
AVHYTMGGLWVDYNLMTNVPGLYCTGEANFSDHGANRLGASALMQGLADGYFVLPYTIGA
YLSKEISVKAIPTDHPAFVEAEARAKGILDTLINIKGTKSVDHFHKRLGHIMWEKCGMAR
NEKGLKEAIEEIRALRAEFWRDVRVPGSVDELNTELEKAGRVADFIELGELMCIDALNRN
ESCGGHFREEYQTEEGEALRDDEHYAYVAAWEFKEGVNFELHKEELKFENIKVAQRSYK
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatttgaattcaaacataccagagggagaattaaccacaaagtggactaagtat
aagtcttctgtgcctttggttaacccgtcaaataaaagaacgatagaggtgatcattgtt
ggctcaggtttagcaggtgcttcggcagcggcaacactggctgaaatgggttataaagtg
aagtgtttctgcttccaggattcaccacgcagagcacattccattgcagcacagggtggt
atcaatgcagcaaagaactaccagaacgacggcgacagtgtataccgtttgttttatgat
accattaaaggcggcgattaccgtgcacgcgaagccaacgtacaccgtttggcagaagtg
agtgcaaacattatagatcagtgtgtggcacagggtgttccgttggccagggagtacggt
ggtttgctggacaaccgctcttttgggggtacacaggtgcaaagaacattttatgcagcc
ggacaaaccggtcagcaattgctgttgggtgcatattctgctttggagcgccagatcggt
atgggtaaggtagaaatgtttacccgtcatgaaatgctggaagtagtaaaaattgatggt
aaagcacgtggtatcattgcccggaacctgatcacaggtgaaattgagcgtcatttcggc
cacgctgtagtattgggaacaggtggttacggaaacgttttttacctgtctacaaatgct
atgggcagtaatgtaaccgcagcctggaaagcacataaacagggggcttattttgccaat
ccctgctatacacaaatccaccctacctgtatcccggtttcgggcgaccatcagagtaag
cttacgctgatgtctgaatcactgcggaatgatggcaggatttgggtgccgaagaaaaaa
gatgatctgcgcaaggcttctgaaatccctgaagatgaaagggattattacctggagcgc
agataccctgcttttggtaacctggtaccgcgcgatgtagcttcaagagcggcaaaagaa
cgctgcgatgcgggttatggtgtgggcgcgtctaaactggctgtatacctcgattttaaa
gccaatacagaacgttatggtcgtattgaggctgctaaggccggaaaccacaatcctgat
aaggaaacctgtatgcgtctgggtactgaggtgatcaaggcaaaatatggtaacctgttt
gatatgtatgcacagatcacaggcgaaaatccttacgaaacaccgatgcggatctatcct
gcagtgcattataccatgggcggactttgggtagattataacctgatgaccaatgtaccg
gggctgtattgcacaggtgaggctaatttctctgaccatggtgccaaccgcttgggggcc
tcggcattgatgcagggactggcagatggttattttgtattgccttataccattggggca
tatttatcgaaagagatctctgtgaaggccattcctacagatcacccggcttttgtcgaa
gccgaggcaagggcaaaaggtattctggatacgctgatcaacatcaaagggacaaaatcg
gtagatcatttccataaacgcctgggtcacatcatgtgggaaaaatgcggtatggcccgt
aacgaaaagggattgaaggaagcgattgaagagatcagagcattgcgtgccgagttctgg
agagatgttcgcgtgccgggatcggttgatgagctgaatacggaactggaaaaggcaggc
cgtgtagccgattttatagaactgggtgagttgatgtgcatagatgcattaaaccgcaac
gaaagctgcggcggccatttccgcgaagaatatcaaacggaagaaggtgaggcactgcgt
gacgatgagcattatgcttacgttgccgcctgggaatttaaggaaggagtaaactttgaa
ctgcataaagaagagttgaagtttgaaaatattaaagtagcacaaagaagttataaatag
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