Pedobacter heparinus: Phep_0297
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Entry
Phep_0297 CDS
T00978
Name
(GenBank) protoheme IX farnesyltransferase
KO
K02257
heme o synthase [EC:
2.5.1.141
]
Organism
phe
Pedobacter heparinus
Pathway
phe00190
Oxidative phosphorylation
phe00860
Porphyrin metabolism
phe01100
Metabolic pathways
phe01110
Biosynthesis of secondary metabolites
phe01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
Phep_0297
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Phep_0297
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
phe01006
]
Phep_0297
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
phe03029
]
Phep_0297
Enzymes [BR:
phe01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.141 heme o synthase
Phep_0297
Prenyltransferases [BR:
phe01006
]
Compound prenylation
Protoheme farnesyltransferase
Phep_0297
Mitochondrial biogenesis [BR:
phe03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
Phep_0297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UbiA
2TM
Motif
Other DBs
NCBI-ProteinID:
ACU02522
UniProt:
C6XZ40
LinkDB
All DBs
Position
348554..349456
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AA seq
300 aa
AA seq
DB search
MKHFFSDFSKLIKFRLTFLVVFSASITFLIGQKAQIYRGELDGINWMNWLILVAGGFLVT
GAANCFNEIIEKDLDKLMTRTKDRPMPAGRMTTGQGLVLGLIMGMLGTWLLGKLNLETGI
LSVFSILLYAFAYTPLKRKSPVAVFVGAIPGALPPLLGYLASFGNATHFVPMDYTIAGIL
FLVQFVWQFPHFWAIAWVLDDDYSKAGFRLLPTTKRDKTSAFITFLSTLILIPVSLLPTF
YGFGGYYIGGVSLMASLVFAWLGFKLWVKLDLASARKVMFCSFFYLPLVQLVLLFDFLAK
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacattttttttcagatttctctaaactcatcaaattcaggctcacctttctggtg
gtgttctctgcatcaattacttttttaattggtcagaaggcgcagatctataggggggaa
ctggatgggattaactggatgaactggctgatattggttgcaggagggtttttagtgacg
ggggcagcgaactgttttaatgagatcatagaaaaggatctggataaattgatgacccgg
actaaagacaggcctatgcctgcaggtcgtatgactaccggacaaggcctggtactgggt
ttaattatgggtatgctgggcacctggcttttgggtaaacttaatctggagacagggatc
ttgtctgtattctctatcctgttatatgcttttgcttacacgcctttaaagcgtaaatcg
ccggtagctgtatttgttggcgctataccaggcgcattgccgcctttacttggctatctg
gcctcatttggcaatgccacacattttgtaccgatggactatacgatagcaggcattttg
tttctggtgcagtttgtatggcaattcccacatttctgggcaattgcatgggtgcttgat
gacgactatagcaaggccggtttccggcttttgccaactaccaaaagggataagacaagt
gcttttattacttttttaagtacgttgatattgattccggtaagtttgctgccaacgttt
tatggctttggtggctattatatcggaggggtttcattgatggcaagccttgtttttgca
tggcttggttttaaattgtgggtaaaactggatctggcgagtgcaaggaaggtgatgttt
tgttcctttttttacctgcccctggtacagttggttttattatttgattttttagctaaa
tag
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