Pedobacter heparinus: Phep_0306
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Entry
Phep_0306 CDS
T00978
Name
(GenBank) hypothetical protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
phe
Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phe02000
]
Phep_0306
Transporters [BR:
phe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Phep_0306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD-like_3
SusD_RagB
TPR_2
TPR_1
Motif
Other DBs
NCBI-ProteinID:
ACU02531
UniProt:
C6XZ49
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All DBs
Position
358314..359759
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AA seq
481 aa
AA seq
DB search
MKKYTIYFFLFMAIAGVGCNKYLDHAPDDRTKLNTPTKVAELLVTAYPRGNAVLLSESMS
DIPAFVSALGIDFPVNQNGYYWKDVEAVDQDSPTYYWNACYTAIATANQALDAIEKASDP
QQYAAQKGEALVARAYAHFMLVTFFSKCYDPATAETDPGIPYVTTPESVVFKSYERKTVA
YTYQQIEKDLLEGIPLIQDKYTVPAYHFTRKAAYAFACRYYLFKKNMDKVIEYANLTFPA
NNFADNVRPWKSYAAYNVQELETAYMNAGNPGNLLIGETVSRLARNYKRPIYSISQNRLR
IILAPVGVTFTALPIYSNSSTYYYLIKFAEHFVRTSINASSGTGYTMVPLLTTEEVLLNR
AEAYIVQGKYTEALADMNTMISTRVTAYSPSANDLTEAKIKSYYANVTTDTKQAYINALL
DIKKAEFVHEGMRWLDILRHKLPVVHRDAAGNEFNLAAEDKRKVLQIPSQVTLSGVEQNP
R
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatatacgatatacttcttccttttcatggccattgccggtgttggatgtaat
aaatatcttgatcatgctcctgatgatcgtaccaaattaaatacgcccactaaagttgct
gagctattggttactgcttatccacgaggtaatgctgttttattgtccgaatctatgtcc
gatattccggcatttgtgagtgcccttggaatagacttcccggtaaaccagaatggctat
tactggaaggatgtagaggctgttgatcaggatagcccaacatattactggaacgcttgt
tacactgcaattgcaacggccaatcaggccttggatgcaattgaaaaagcctcggatccc
cagcaatatgctgcgcaaaaaggtgaggccctggttgcaagggcgtatgcacattttatg
ctggtaacgtttttctcgaaatgttatgaccctgcaacagcagaaaccgatcccggtatt
ccttacgtcaccacgccggaatcggttgtttttaaaagctacgagcgtaaaacagtggct
tatacttatcagcaaattgaaaaggatctgttggagggtattccactgatacaggataaa
tacacggttcctgcttaccattttacccgtaaggccgcctatgcttttgcctgccggtat
tatctgtttaaaaaaaatatggacaaagtgattgagtatgccaaccttacctttccggca
aataattttgcagataatgtaaggccatggaaatcttatgctgcctacaatgtccaggaa
ttggaaacggcttatatgaatgctggtaatcctggcaacctcttgatcggggaaactgtc
tcgcgtttggccagaaactataaaaggccgatatattcgatcagccagaaccgtttaagg
atcatattggcacctgtaggggtaacatttactgcattacctatttattccaacagctca
acctattattacctgatcaaatttgctgaacattttgtgcgtaccagcatcaatgcttcc
agtggcaccggctatactatggtacctttgttaaccaccgaagaggttttgttaaaccgt
gctgaggcttatattgtacagggtaaatatacagaggcgctggcggatatgaatacaatg
atcagtacccgcgtaactgcctatagcccgtctgcaaatgacttaaccgaagcaaaaata
aaaagctattatgccaatgtaaccactgataccaagcaggcctatatcaatgcgctactg
gatattaaaaaagctgaatttgtacatgaagggatgcgctggctggatattttaagacat
aaattaccggtagttcaccgtgatgccgctggtaacgaatttaatttagctgccgaggat
aaacggaaagtattgcagatcccttcacaggttactttatcaggtgttgaacaaaatcca
cgttaa
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