Pedobacter heparinus: Phep_0472
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Entry
Phep_0472 CDS
T00978
Name
(GenBank) Heparin lyase
KO
K19050
heparin lyase [EC:
4.2.2.7
]
Organism
phe
Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Phep_0472
Enzymes [BR:
phe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.7 heparin lyase
Phep_0472
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Paralog
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GFIT
Motif
Pfam:
Polysacc_lyase
Alginate_lyase2
Motif
Other DBs
NCBI-ProteinID:
ACU02696
UniProt:
C6Y001
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Position
complement(561445..562599)
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AA seq
384 aa
AA seq
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MKKQILYLIVLQQLFLCSAYAQQKKSGNIPYRVNVQADSAKQSEIIDNKWVAVGINKPYA
LQYDDKLRFNGKPSYRFELKAEDNSLEGYAAGETKGRIELSYSYATTNDFKKFPPSVYQN
AQKLKTVYHYGKGICEQGSSRSYTFSVYIPSSFPDNATTIFAQWHGAPSRTLVATPEGEI
KTLSIEEFLALYDRMIFKKNIAHDKVEKKDKDGKITYVAGKPNGWKVEQGGYPPLAFGFS
KGYFYIKANSDRQWLTDKADRNNANPENSEVMKPYSSEYKTSTIAYKMPFAQFPKDCWIT
FDVAIDWTKYGKEANTILKPGKLDVMMTYTKNKKPQKAHIVNQQEILIGRNDDDGYYFKF
GIYRVGNSTVPVTYNLSGYSETAR
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacaaattctatatctgattgtacttcagcaactgttcctctgttcggcttac
gcccagcaaaaaaaatccggtaacatcccttaccgggtaaatgtgcaggccgacagtgct
aagcagagcgagattattgacaacaaatgggtggcagtaggcatcaataaaccttatgca
ttacaatatgacgataaactgcgctttaatggaaaaccatcctatcgctttgagcttaaa
gccgaagacaattcgcttgaaggttatgctgcaggagaaacaaagggccgtatagaattg
tcgtacagctatgcaaccaccaatgattttaagaaatttcccccaagcgtataccaaaat
gcgcaaaagctaaaaaccgtttatcattacggcaaagggatttgtgaacaggggagctcc
cgcagctataccttttcagtgtacataccctcctccttccccgacaatgcgactactatt
tttgcccaatggcatggtgcacccagcagaacgcttgtagctacaccagagggagaaatt
aaaacactgagcatagaagagtttttggccttatacgaccgcatgatcttcaaaaaaaat
atcgcccatgataaagttgaaaaaaaagataaggacggaaaaattacttatgtagccgga
aagccaaatggctggaaggtagaacaaggtggttatccaccgctggcctttggtttttct
aaagggtatttttacatcaaggcaaactccgaccggcagtggcttaccgacaaagccgac
cgtaacaatgccaatcccgagaatagtgaagtaatgaagccctattcctcggaatacaaa
acttctaccattgcctataaaatgccctttgcccagttccctaaagattgctggattact
tttgatgtcgccatagactggacgaaatatggaaaagaggccaatacaattttgaaaccc
ggtaagctggatgtgatgatgacttataccaagaataagaaaccacaaaaagcgcatatc
gtaaaccagcaggaaatcctgatcggacgtaacgatgacgatggctattacttcaaattt
ggaatttacagggtcggtaacagcacggtcccggttacttataacctgagcgggtacagc
gaaactgccagatag
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