Pedobacter heparinus: Phep_0518
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Entry
Phep_0518 CDS
T00978
Name
(GenBank) RagB/SusD domain protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
phe
Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phe02000
]
Phep_0518
Transporters [BR:
phe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Phep_0518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Motif
Other DBs
NCBI-ProteinID:
ACU02742
UniProt:
C6Y0I1
LinkDB
All DBs
Position
626487..627938
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AA seq
483 aa
AA seq
DB search
MVLSIEHKMNVMNIKHKILLMALVLLSASGCKKSFLELAPESNANAETFYKTKADMDLAV
NAAYSTLYNVYDPEGPVSYTAEMMGDNTTLYIIAGNQTDKFAFKDYNLQTNNTMVYSFWR
TYYSSLYSINIILSKLDDSELTATEKESVKAQMSFLRGLYYFNMVRLWGDVPIVTKPLSV
EETYKVVRSPKADVYKLILDDLTFAAEKLPPTAVGRATQGAALTAKGEVYLTLNDKANAT
TALMSVYTSQNYKLQGTYAAVFGPTVKNTKESIFEIQYLGGASSISTGTYSKYYRNYSPN
VNVFGFSGIGMNQVTDDLYNEYETGDPRRELSITLGFQNGAVFQEQKYPIKWIDPTAVKT
DNNVLANNNFMVYRFADVLLMLSEATDDPKYLNEVRTRVNLPLFGTPGYPSAKYPTLALA
IEHERRVELAIEFHRWFDLKRTGRAVAVLSAKGKPVTEKKLLLPIPETVRLQNGIITQND
GYN
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggttttatcaattgaacataaaatgaatgtcatgaatatcaaacataaaatcctgttg
atggccctggtgctgctatctgcttcgggttgtaaaaagtcttttcttgaattggcaccg
gaatccaatgcaaacgccgaaacgttctacaaaacgaaagcagatatggaccttgctgta
aatgccgcctattctacactttataatgtctatgatcctgaaggtccggtatcctatact
gcagaaatgatgggtgacaacaccacactgtacatcattgccggaaatcagacagataaa
tttgcatttaaagattacaacctgcaaaccaacaatacgatggtatacagtttctggagg
acctattattcctctctgtacagcatcaacattattttgagtaaacttgatgattcggag
ctgacggcgacagaaaaggaaagtgtaaaagcgcagatgtcttttctgaggggattgtat
tacttcaatatggtgcgtttatggggagatgttcccatcgtaacgaaaccgctttcagta
gaagaaacctataaggtagtccgttcgcccaaagcagacgtgtataagttgattttggac
gatctgactttcgctgcagaaaaattaccgccgactgcagttggaagagctacacaaggc
gcagctttaaccgctaaaggagaagtttacctcactttaaacgataaggccaatgcaaca
acggctttaatgtcggtatacaccagccagaattataagttgcagggtacttatgccgcg
gtatttggtccgacagtgaaaaatactaaagaatccatctttgaaattcaatatcttggc
ggggcaagcagcatatcgactggtacctacagcaaatattaccgcaattattctccaaat
gtaaatgtatttgggtttagtgggattggtatgaaccaggtgaccgacgatctgtacaat
gaatatgaaacgggcgatccaagacgtgagctcagtataaccctgggttttcagaacggg
gcggtattccaggaacagaaatatccgatcaaatggatagatccaactgcggttaaaaca
gataacaatgtgctggccaacaacaatttcatggtttatcgctttgcagatgtcttgctg
atgctttcggaagcgactgacgatccgaaatacctcaatgaagtcaggacaagggtaaac
ttgcctttatttggaacgccgggttatccttctgcaaaataccctacactggccctcgcc
attgaacatgaaagaagggtagagctggccattgagtttcaccgctggtttgacctgaaa
agaacgggtcgtgcggtcgctgttttaagtgcaaaaggaaagccggttactgagaaaaag
cttttattgccgattccggagaccgttaggttgcaaaatggaattattacacagaacgac
ggctacaactaa
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