Pedobacter heparinus: Phep_0520
Help
Entry
Phep_0520 CDS
T00978
Name
(GenBank) periplasmic binding protein/LacI transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
phe
Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phe03000
]
Phep_0520
Transcription factors [BR:
phe03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Phep_0520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_Tnp_ISL3
HTH_31
Motif
Other DBs
NCBI-ProteinID:
ACU02744
UniProt:
C6Y0I3
LinkDB
All DBs
Position
629930..630946
Genome browser
AA seq
338 aa
AA seq
DB search
MSSLKNVADLAGVSVATVSRVLNSDEVVKYETKVKVMNAIKTLKYSPNRVAQRLRTTRKS
SRLIGLLIPDIQNPFYVDVIRGIEVFAYANNAAVVIGNFSQDEKKEKLYLDILKSESVDG
FIVAPSNEKDIYIKELVKDGFPVVCIDRGLSDIEVDLVKVDNQKGAFNAIEHLIKLQHTR
IGHITGNQLIPTTMERLAGYEQALKQYNIAIDPEIIVSRESDYESGAELAAYLLDLENPP
TAIFTGNNLLTLGALETINKRGLKIPEDIAIIGFDDVYWANSLNPPLTAVRQPGFEIGKR
AMELLIQRILSPEREVASIIYKTELMIRKSCGSKEKRL
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtctaaaaaatgtagccgatctggcaggtgtttctgtggccactgtatccagg
gttttaaattcagatgaagtggttaagtatgagactaaggtgaaggtgatgaatgcgata
aaaacactgaaatattcgcccaatcgggttgcccagcgtttgcgtaccaccaggaaaagc
agcaggttaattggtttgctaatccctgatatccaaaaccctttttatgtagatgtgatc
agggggatagaggtttttgcttatgcaaataatgccgctgtggtgattggtaacttctct
caggatgaaaaaaaggaaaagctctacctggatatcctaaaatcagaatcggtagatggt
tttattgtagcgccttcaaatgaaaaggacatttacattaaagagctggtgaaagatggg
ttccctgttgtttgcattgaccgtgggcttagcgatattgaagttgacctggtgaaagtg
gataaccaaaagggcgcctttaatgccattgaacatttaattaaattacaacatacacgg
atcgggcacattacgggaaatcagctgataccgacaacaatggagcgtttggcaggttat
gaacaggcattgaagcaatacaacattgctatagatcctgaaattattgtaagcagggaa
tcagattatgaaagtggtgctgagctggccgcttatctgctggacctggaaaatcccccg
accgctatttttacagggaataacctgctcacactgggcgctttggaaaccattaataaa
agaggtttaaaaattccggaggatatagccatcatcggatttgatgatgtttattgggca
aattctttaaatccgcccctcacggcggtcagacagccgggttttgagatcggcaaacgt
gcaatggaattgctgatccagaggattctctcgccggagcgcgaagtggccagtatcatt
tataaaacggaactcatgatcaggaaatcctgtggaagtaaagaaaaacgactgtaa
DBGET
integrated database retrieval system
