Pedobacter heparinus: Phep_0534
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Entry
Phep_0534 CDS
T00978
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
phe
Pedobacter heparinus
Pathway
phe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Phep_0534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phe03400
]
Phep_0534
DNA repair and recombination proteins [BR:
phe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Phep_0534
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Ortholog
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GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_29
SbcC_Walker_B
AAA_27
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ACU02758
UniProt:
C6Y0J7
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All DBs
Position
641253..642356
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AA seq
367 aa
AA seq
DB search
MWLKNITLLNFKNYTDANVSFSKTVNAFVGDNGAGKTNLLDAIHYLCLCKGYFNPIDTQQ
IKAGQDLFLIQGDFDRQEKNEKITCGVKRNQKKQFKRNKKEYDKLANHIGLFPLVMISPY
DTNIIMEGSEERRRFMDNVISQTDTNYLDELILYNRHLLNRNALLKQIAVTRSYDPTLLE
IYNDQLVASGLKIYAKRQQFMIEFIPLFDKYYQFLTEDQERVSLQYQSQLNDAAFEQLLQ
QSVEKDKVLERTTTGIHKDELIFTISDMALKKFGSQGQQKSFLIALKLAQYAYLQKYKGF
KPLLLLDDIFDKLDDKRMHKLMEMVSHHDFGQIFITDTGKERVLAVFNKIQVPVTLFEVN
NGAINHA
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtggttaaaaaacattacccttcttaattttaagaactatacagatgcaaatgttagt
ttttcaaaaacagtaaatgcttttgtaggggataatggagcgggtaaaaccaatttactc
gatgccatccattacctttgcctgtgcaaagggtactttaatccaatcgatacacagcag
atcaaggcggggcaggacctgtttttaattcagggagattttgatcgtcaggaaaaaaat
gaaaagatcacctgcggggtaaaaagaaatcagaagaaacagtttaagcgaaataaaaaa
gaatacgacaaactggccaatcatatcggactttttccactggtcatgatctcgccctat
gataccaatattattatggagggaagtgaggaaagacggcgttttatggataacgtgatt
tcgcagactgatacaaattacctggatgaactgattctgtacaaccgacatttgttgaac
cggaacgccctgctaaaacaaatagcggtaaccagaagttatgatcctaccttgctggaa
atctataacgatcagcttgtggcttcaggtttaaagatatatgccaaacggcagcagttt
atgattgaatttattcccttgtttgataaatattaccagtttttaacagaagatcaggaa
agggtaagtttgcaatatcagagtcagctgaatgatgctgcctttgagcaattgctgcag
cagtctgtagaaaaagacaaggtgctggaaagaacgactacgggtattcataaggatgag
ctgatatttaccattagcgatatggcgttaaagaagtttggctcacaggggcaacaaaaa
tcttttttaattgcactgaaactggcgcaatatgcttatcttcagaaatataaaggcttt
aaacctttgctgttgctggacgatatttttgataaactggatgataagcggatgcataaa
ctgatggaaatggtatcacaccatgattttggacagatctttataacagatacggggaag
gaaagggtgctggcggtatttaataaaattcaggtaccggtaactttgtttgaagtcaat
aacggggcaatcaaccatgcgtaa
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