Pedobacter heparinus: Phep_0539
Help
Entry
Phep_0539 CDS
T00978
Name
(GenBank) phosphoesterase RecJ domain protein
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
phe
Pedobacter heparinus
Pathway
phe00920
Sulfur metabolism
phe01100
Metabolic pathways
phe01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
Phep_0539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phe03400
]
Phep_0539
Enzymes [BR:
phe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
Phep_0539
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
Phep_0539
DNA repair and recombination proteins [BR:
phe03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
Phep_0539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ACU02763
UniProt:
C6Y0K2
LinkDB
All DBs
Position
644300..645310
Genome browser
AA seq
336 aa
AA seq
DB search
MLSISELKSLLATPQKIVITTHHKPDGDAMGSSLGLYAYLIQKGHHVKLITPTDYPYFLH
WLPNNADVLIYTEDQEQSARLVEEAAIIFCLDFNTLSRINELGELVRASNAFKIMIDHHL
EPEDFDDYRHWSINACAAAQLVYDFIVNELGDGAMMNKDIATCLYTGIMTDSGSFRFESA
NAAVYRIAADLIDLGAEHWRIHQLVYDNATENRLRFLGYCLSEKLEVLREFNTAVITVTK
EELNRYKIVTGDTEGIVNYALSVNGIKLAAFIIERTDKVKLSLRSTGDFPANEICKKYFN
GGGHRNAAGGFSDKNLTDTVQEFKALLSDYKNQLLQ
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgctatctatttcagaattaaaatctttactggccacgccccagaaaattgtaattacg
acacatcacaaacctgatggtgatgcgatgggttcgtctttggggttatatgcctatctg
atccagaagggacaccatgttaaattgattaccccaacagactatccttactttctgcat
tggctgccaaataatgccgatgtgcttatttatacagaagatcaggaacaatcggcaaga
ctggtagaagaagctgcaattattttttgtcttgattttaataccctgtcaaggatcaat
gagctgggtgaactggtgcgtgcttccaatgcttttaaaatcatgatagaccatcacctg
gaacctgaagattttgacgattaccgccattggagcattaacgcatgtgctgctgcccag
ctggtttacgattttattgtgaatgaactgggagatggggcgatgatgaacaaagacatt
gctacctgtctgtatactggtattatgacagattcgggctcattcagatttgaatctgca
aatgctgccgtatatcgcatcgcggccgatctgattgatctcggtgcagaacactggaga
atccatcagctggtatacgataatgcaacagaaaaccgtttacgctttttgggttattgt
ttaagcgagaaactggaagtgctgagagagtttaataccgcggttattacggttacaaaa
gaagaactgaacaggtacaaaatcgtaaccggtgatacagaaggtattgtaaattatgca
ttgtcagttaatggtattaaattggctgcatttattattgaaagaactgataaagttaaa
ttatctttgcgctccacaggggatttccctgcgaacgagatttgtaagaaatactttaac
ggcggagggcacagaaatgctgccggaggtttttcggataaaaatttaacagatactgta
caggagtttaaagcacttttgtcagattataaaaatcagttattgcaataa
DBGET
integrated database retrieval system
