Pedobacter heparinus: Phep_0568
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Entry
Phep_0568 CDS
T00978
Name
(GenBank) regulatory protein DeoR
KO
K02081
DeoR family transcriptional regulator, aga operon transcriptional repressor
Organism
phe
Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phe03000
]
Phep_0568
Transcription factors [BR:
phe03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
Phep_0568
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
GntR
CggR_N
RepL
HTH_Mga
MarR
HTH_41
Put_DNA-bind_N
CUB_CDCP1_2
HTH_36
Motif
Other DBs
NCBI-ProteinID:
ACU02790
UniProt:
C6Y0M9
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All DBs
Position
complement(680728..681492)
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AA seq
254 aa
AA seq
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MINIAERHQYILNKIQTDGTIDVQSLCKKLKVSSVTIRKDLKLLEDKNLLFRTHGGATLN
NPYTVDKPVNEKEHLQSAEKMKIGTMAAELIEENDSIIIASGTTVLAMARCIKPKGNLTV
ITSALNVALELLHHNDIEIIQLGGLLRKSSSSVAGPYSDNVLGNVFCSKLYLGVDGIDLE
FGLTTTNAYEAHLNRQMIDSSQKIIVLADSTKFGKRGFGRICGIEEVDHIITDSGIPEQT
RKNLQSMGIKVSII
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgattaacatagctgaacgacaccaatatatattaaacaaaattcaaacagacggcact
attgatgtacagtcactttgtaaaaagttaaaagtttcgtcggttaccatccggaaggac
ctgaaactactcgaagacaagaacctcttgttcaggacccatggaggagccacactaaac
aacccttatacggttgataaacctgtaaatgaaaaagaacatctgcaatcggcagaaaag
atgaagattggcacaatggctgctgaactgattgaagaaaatgattccattatcatcgca
tcgggaacaacggttctggccatggcgcgctgcatcaaacccaaaggaaatttaactgtt
attacctctgcattaaatgttgccctcgaattgctgcaccacaatgatattgagatcatc
cagctgggaggcctgttgaggaaaagctcttcttctgttgcaggcccttattccgataat
gtattgggcaatgttttttgcagcaaattatacctgggtgttgacggcattgatctggaa
tttggattaacgacaacaaatgcctatgaggctcacttaaacaggcagatgatagattcc
tctcaaaaaataattgtacttgccgactctaccaaattcggaaaacgtggcttcggaaga
atatgcggcattgaagaagtagatcatatcattacagatagtggcatccccgagcagacc
aggaaaaacctgcaaagcatgggcattaaggtttctattatttaa
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