Pedobacter heparinus: Phep_0736
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Entry
Phep_0736 CDS
T00978
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
phe
Pedobacter heparinus
Pathway
phe03030
DNA replication
phe03430
Mismatch repair
phe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Phep_0736
03430 Mismatch repair
Phep_0736
03440 Homologous recombination
Phep_0736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phe03032
]
Phep_0736
03400 DNA repair and recombination proteins [BR:
phe03400
]
Phep_0736
Enzymes [BR:
phe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Phep_0736
DNA replication proteins [BR:
phe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Phep_0736
DNA repair and recombination proteins [BR:
phe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Phep_0736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
RuvB_N
AAA_22
AAA_14
AAA_5
AAA_2
TIP49
Rad17
AAA_18
DNA_pol3_delta_C
PIF1
AAA_30
RNA_helicase
AAA_24
ResIII
AAA_7
AAA_19
VapE-like_dom
nSTAND3
AAA_assoc_2
AAA_16
RnlB_antitoxin
AAA_33
Motif
Other DBs
NCBI-ProteinID:
ACU02958
UniProt:
C6Y1I2
LinkDB
All DBs
Position
complement(859475..861283)
Genome browser
AA seq
602 aa
AA seq
DB search
MENFIVSARKYRPATFETVVGQQHITGTLKNAIKNNQLAQAFLFCGPRGVGKTTCARILA
KTINCTSLTAEQEACGTCESCVSFQTGHSFNFHELDAASNNSVDDIRSLIEQVRIPPQAG
KYKIYIIDEVHMLSANAFNAFLKTLEEPPSYAIFILATTEKHKILPTILSRCQIFDFNRI
QVEDISGHLNKIAQRENIAVEADGLHIIAQKADGGLRDALSMFDQIVSYTNKNLTYKSVI
DNLNILDYDYYFKLTQHLTATDVSHTLILFDEILNNGFDGNNFINGLASHLRNLLVAKDP
QTTKLLEVSENIKQKYISQSQQTPVSFILTALNLANQCDLNYKNSKNQRLQVEMALIKMC
HIPSVLQLASQPLTNTATDPDQIKKKTSISTEQSSFTAPATSVAESPVPVNLPPVIPAEV
NPTVNIPKKTPPPSSKIVLNPISLAQQSKVAMLVPSLNGIQNNAEGADGDEPKYITGSDK
EIFTQDQLLLYWNQYTSMVKEANRINVYTLMSTSVPILEKPDEILVQVEHKLQEDLLQEE
MIDLLNFLRPRLKNFSIYIKTKQVVKEVVNRLYTSTEKYQYLVEKNPKLEEMRRRFNLDV
NP
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggagaattttatagtatcagcccgtaagtaccgtccggcaacgtttgaaaccgttgtt
ggccagcagcacattaccggcactttaaaaaacgccattaaaaacaaccagctggcacag
gcttttttattttgcggacccaggggagtaggtaaaacaacctgcgcacgtatccttgcc
aaaaccatcaactgtaccagcttaaccgccgaacaggaagcctgcggcacctgtgagtcc
tgcgtttcctttcaaaccggccattcctttaactttcacgagcttgatgcggcttctaat
aactcggtcgacgacatcaggagcctgatcgaacaggtccgaatcccgccgcaggcagga
aaatataaaatctatatcatagatgaggtgcacatgctttcggcaaatgccttcaatgcc
ttcctgaaaacactggaagaaccaccttcctatgccatatttatattggctaccaccgaa
aagcacaaaatactgcccaccatattgtcgcgctgccagatctttgatttcaaccgcatc
caggtagaggacatatcaggccatttaaataaaattgcacagcgcgaaaacatagccgta
gaggctgatgggctccacattattgcccaaaaggcagatggtggcttaagggatgcactt
tccatgttcgaccagattgtaagttacaccaataagaacttaacttataaatcggtaatc
gacaacctcaacatcctcgactacgactactattttaagcttacccaacaccttacggct
acagatgtaagccatacactcatcctctttgatgaaatcctgaacaatggttttgatggc
aataacttcatcaacggattggccagccacctcagaaacctgcttgttgccaaagacccg
caaaccaccaaactgctggaagtaagcgagaacatcaaacaaaaatacattagccaaagc
cagcaaacgccggtttcatttattctgacggccttaaacctggctaaccagtgcgatctg
aactacaaaaacagtaaaaaccagcggctccaggtagagatggccctgatcaagatgtgc
cacatcccatcggtactccaattagccagccaacccttaaccaataccgcgactgaccca
gatcagattaaaaaaaaaactagtataagtactgaacaatcctcatttacagctccggcc
acttcggtagccgaaagtccagtccctgtaaatctaccccctgttatacccgctgaagtt
aacccgacagtcaatatacctaaaaaaacgcccccaccatcttccaaaattgtattaaac
ccaatatccctggcacagcaaagtaaggttgccatgcttgtaccttcattaaacggcatc
cagaacaacgcagaaggagcagatggcgatgaacctaaatacatcaccggaagtgataaa
gaaattttcacacaggaccagttgctgctttactggaaccaatacaccagtatggtgaaa
gaagccaacaggatcaatgtatataccctgatgagtacctcagttcccatcctcgaaaaa
ccggatgaaatcctggtacaggtagaacacaaactacaggaagacctgcttcaggaagaa
atgatagacctgctcaattttttgaggccaaggcttaaaaacttcagcatctatatcaaa
accaaacaagtggtaaaagaagtggtaaaccgtctatataccagcaccgaaaaataccag
tacctggtagaaaaaaatccaaagctggaagaaatgcgcagaaggttcaacctcgatgta
aacccttaa
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