Pedobacter heparinus: Phep_0755
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Entry
Phep_0755 CDS
T00978
Name
(GenBank) RagB/SusD domain protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
phe
Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phe02000
]
Phep_0755
Transporters [BR:
phe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Phep_0755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Motif
Other DBs
NCBI-ProteinID:
ACU02977
UniProt:
C6Y1K1
LinkDB
All DBs
Position
878100..879584
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AA seq
494 aa
AA seq
DB search
MNCYLNYTRTAALLLLTVLMVPSCKKFLEEDLKSQVSVGNFYKTEADAIAAVNAVYAYLN
STSTGSTAGVYHSSFWVTAGLASDEMLNNQLGTPDLDQLSSFTNGPQNKTLLEIWQMNYK
TITVANIAIERIPLINMDPTLRTRLVNEAKFLRGLMYFNLVRLFGDVPLLTKEVETLKPS
RTAAATVYDQVIADLSAAEALPLSYPAGNGKGRATSGAAKAILAKVYLTRKVYDKAAAKA
LEVINSKQYQLWDDYADVFKLSSRNGKEAIFSVGFGDGGGAISFWEVGQFNVRLLPAALS
EEGVENAQGWQIPTLNLYSTYDIDDRRRSVTFVTEIHNKNSTTSQIRPYIQKYWDRVAEP
KANGSANDFPVIRYADVLLIYAEASSEQNDPGTAAQYINMVRKRARFNGTVYLNTVPDYG
NLSKEAFRTAVLKERRMEFVAEGQRWFDLARTGTLETLVPLAKPGVTPKAKNYLFPIPQQ
ERDINENLTQNLDF
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaattgttatttaaactataccagaacagcagccctgcttcttttaactgtgctgatg
gtgccatcctgtaaaaagtttttagaggaagaccttaaaagccaggtttctgtaggcaat
ttttataaaacagaagccgatgccattgccgcagtaaatgcggtgtatgcctatttaaat
tctaccagtacaggttcaactgcaggtgtttaccatagctctttctgggttactgccggc
ctggcatcggatgagatgctgaacaatcagttgggtacgcccgatctggaccagttgtct
tcctttaccaatggcccgcaaaacaaaacgctgctcgagatctggcagatgaattataaa
accattacggtggccaatattgccattgaaaggatcccgctgatcaatatggaccctaca
ttaaggaccagactggttaatgaggctaaatttttaaggggcctgatgtactttaacctg
gtgcgtttatttggggatgtgccgctgttaaccaaagaagtggaaacgctgaaaccttcg
agaaccgctgcagcgacggtgtatgatcaggtgattgccgaccttagtgctgctgaagct
ttaccactgagttatcctgcgggcaatggaaaaggccgtgcgacttcgggcgcagcaaaa
gccattcttgctaaagtttacctgaccaggaaggtgtatgataaggctgcagcaaaagct
ttggaagtgatcaattccaaacaatatcagctttgggacgattatgctgatgtatttaaa
ctgtcgagccgcaacggcaaagaggctatattttctgtagggtttggtgatggcggcggt
gcaatttccttttgggaagtaggacagttcaatgtgcgtttgttgcctgcagcattgagt
gaagaaggggtagaaaatgcccagggctggcaaatcccgacgttgaacttatacagcact
tatgacatcgacgaccgccgcaggtcggttacgtttgtaaccgagatccacaataaaaat
agtaccaccagccagatcaggccttatatccagaagtattgggacagggttgcagaacct
aaagcaaatggttcggccaatgattttccggtcatccgttatgccgatgtattgctgatc
tatgccgaggcatcgagtgaacagaatgatccgggaacggcggcacagtacatcaatatg
gtgcgtaaaagggcgcgctttaatggtacggtgtacctgaatacagtacccgattatggt
aatttaagcaaagaggccttccggacagcggtcttaaaagaaagaaggatggagtttgtg
gccgaagggcagcgctggtttgatctggcacgtaccggaacacttgaaactttggtaccc
ctggccaagccaggtgtaacgccaaaagcaaaaaattacctgttcccgattccacagcag
gagcgggacatcaatgaaaatcttacccagaacttagatttctag
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