Pedobacter heparinus: Phep_0805
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Entry
Phep_0805 CDS
T00978
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
phe
Pedobacter heparinus
Pathway
phe00550
Peptidoglycan biosynthesis
phe01100
Metabolic pathways
phe01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Phep_0805
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Phep_0805
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
phe01011
]
Phep_0805
Enzymes [BR:
phe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Phep_0805
Peptidoglycan biosynthesis and degradation proteins [BR:
phe01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Phep_0805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ACU03027
UniProt:
C6Y234
LinkDB
All DBs
Position
complement(952865..954811)
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AA seq
648 aa
AA seq
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MDNLFGRKYVIQGLFIAIGLILLGTLFYIQIASDKYFLSAEFNVLRKIYTFPARGVIFDR
NEKPLAQNEAVYDLMVIPNQVKEMDTLALCNIIGIDTVAFRKNLKKVSNQSRYQPGIFER
QLSVETYATLSEQLSRFPGFFVQSRTIRHYPDSVAAHFLGYIKEVSSTDIQNSEGYYRSG
DYIGKSGVEKSYETLLRGERGVVNMLYDARNVPKGSYAEGRFDTAAVSGDRLISSLDLKL
QKLGEELMHNKVGSIVAIEPASGEILAFVSSPSYDPNLMVGRQSGNNYMKILVAPNRPFT
IRPIQGYYSPGSSFKPLDALIGLQEGVIDPNTTFNCPGYFRVGNHTVKCEHVDGNIALRR
GLARSCNTYACYVFQKLITQRKYANQKLAYDDWQKKVRKFGLGEKSGIDLPSERAGRLYD
AAYYSKKYSKYWNFGTVISLAIGQGEMDATPLQMANIMAIIANRGYYIKPHLVKAIGKDK
VIKKEYVKKNYVDVDAVHFDPVIDGMQDAVNAPWGTAIQSRIEGILMCGKTGTVQNPRGK
NHSVFIGFAPRDNPKIAIAVIVENAGYGSTYAAPIASYIAEQYLKGSLPKNKLAQVEWMK
KQVILPVPPKPKVKPKVDTTDSTLKIIPQVIKPDNKSTEKTVNKPTTK
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggataatctgtttggccgtaaatatgtaatacagggtttattcattgccattggttta
atcttgctgggtaccctgttttatattcagatagcgagtgataaatattttctttctgca
gaatttaacgtactgcgcaagatctatacttttccggcacggggggtaatatttgatcgt
aatgaaaaaccactggcccagaatgaagctgtatacgatttaatggtgattcccaaccag
gtaaaggaaatggatacattagcgctgtgcaatattataggtatagatacggtcgctttc
agaaaaaacctgaaaaaagtttccaaccaatcgaggtatcagccaggcatttttgagcgg
caattatccgtcgaaacttatgccactttatcggaacagctttccaggtttcccggtttt
tttgtacaaagcagaacgatcaggcattatcctgatagtgtagccgcccatttccttggg
tatattaaagaagtatcttctaccgacattcaaaactctgaaggctattaccgctctggt
gattacattggtaaatcaggagtagaaaaatcgtacgagactttgttaaggggagaaagg
ggcgtggttaacatgctgtacgatgcccggaatgttcctaagggaagctacgcagagggc
cggtttgatactgcagcggtgtctggcgacaggctcatctcttctctcgaccttaagctc
cagaagcttggtgaagagctgatgcacaataaagtgggcagcattgtagccatagaacca
gcatccggggaaatcctggcttttgtaagcagtccgagttacgaccccaacctgatggta
ggtagacaatcaggcaataattatatgaaaatattggttgcaccgaacagacctttcacc
atacgtccgatacaaggttactattcacctggatcttctttcaaacctttggacgctttg
atcggtctgcaggaaggtgttatagacccaaacaccacattcaactgtcccggatatttc
cgcgtagggaaccacacagtaaaatgtgagcacgtagatggcaatatcgctttgcgaagg
gggcttgccagatcctgtaacacttatgcctgctatgtgtttcaaaagctgattacacag
cggaaatacgcaaaccagaagcttgcctatgacgactggcaaaagaaggtcagaaaattt
ggtctgggcgaaaaatcagggatagacctgccatctgaacgtgctggacgtttatacgac
gccgcctattattctaaaaaatacagtaaatactggaactttggcacagtgatttccctg
gccataggacagggagaaatggatgctaccccactacaaatggccaatattatggccatt
atcgccaacaggggctattacattaaaccccacctggtaaaagccatcggtaaagacaag
gtgatcaaaaaagaatacgtcaaaaagaattacgtagatgtggatgcggtacattttgac
cctgtaattgatggtatgcaggatgctgtaaatgcaccatggggaaccgctatccaatcg
aggatcgaaggcattctgatgtgtggtaaaaccggaacggtacaaaatccacgtggtaaa
aaccactctgtatttattggttttgccccgcgggacaatccaaaaattgcgattgccgta
attgtggaaaatgctggttatggcagcacttacgctgcccccatagccagctatattgca
gaacaatacctgaaaggaagcctgcctaaaaataaactggcccaggtagaatggatgaaa
aaacaggtgatccttccggtaccgcctaagccaaaggtaaaacccaaagtagatacaacc
gactcgacattaaaaataattccgcaggtaataaagccagacaataaatcaacagaaaaa
acggtaaacaaacccactacaaaatga
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