Pedobacter heparinus: Phep_0952
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Entry
Phep_0952 CDS
T00978
Name
(GenBank) Tetratricopeptide domain protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
phe
Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phe02000
]
Phep_0952
Transporters [BR:
phe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Phep_0952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD-like_3
SusD_RagB
TPR_2
TPR_1
TPR_8
TPR_12
ANAPC3
NatA_aux_su
ARM_TT21_N
Motif
Other DBs
NCBI-ProteinID:
ACU03174
UniProt:
C6Y2W1
LinkDB
All DBs
Position
1110075..1111427
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AA seq
450 aa
AA seq
DB search
MKNQIFYLALLLCTFNSCKSDYLEVKPRQSLLVPTTKTELQALLDNLDVMNNAPGIVQVA
TDDILIPDASLPSLASPFEKNAYIWEKDVFPDPNVPEWTLAWRQVFYANVVLEMISGKSE
TEKPTFDELKGAALFFRAIGYYHLTQMFTNGFDPATAASEKGLPIRTVADVNQSPPRGKL
LDTYNFMTGDLLEASRLLPKLSAYKSRPNQVASFSLLARIYLVMQDYDKAFEYADKAIQL
NGTLINFNTLNSASARPFPAVLPNGNGEVSFYAAQISYSFMSFLSSSVNVNPALYQLYDS
NDLRKTIFFNASGKNFKGNYNNVSRLFGGIANDEIYLIRSEAQIRRNKLQEGLDDLNTLL
INRYKTGTFFSYTVSNTPDPLSLVLNERRKELPFRGQRWTDLRRLNQDAKYKTILTRQVN
GIDYNILPLDKRYTYPIPQSEILNSGMEQN
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatcaaatattttacctggccctcttattgtgtacattcaatagctgcaaatcc
gactatctggaagtcaaaccaaggcagtctctactggtgcccactaccaaaactgagctg
caggccttgcttgataatttagacgtgatgaataatgcacctggtatcgttcaagtagct
acagatgatattttgattcctgacgcttcactgccctcactcgcatccccatttgaaaaa
aatgcctacatatgggagaaagatgtttttccagaccccaatgtcccagagtggacttta
gcctggaggcaggtcttttatgcaaatgtagtactggagatgatcagtggtaaaagcgaa
accgaaaagcccacttttgatgagttgaaaggcgctgcactatttttcagggcaatcggc
tattatcatcttacccaaatgtttaccaatggttttgatcccgcaactgctgcttcagaa
aagggtttacctatccgcactgtagcagatgtcaaccagtcgccgccaagaggaaaattg
ttggatacctataatttcatgaccggtgatttgttagaggccagccgcctgcttccaaaa
ttatcggcttataaaagtaggccaaaccaagtggcctcattttctctgctggcaaggata
tatctggtgatgcaggactatgataaggcttttgagtatgctgataaagcgatacagttg
aatggtacccttatcaacttcaataccttgaactccgctagcgccaggccttttccagca
gtactaccaaatggtaatggtgaggtaagtttttatgcggcacaaatatcttattctttt
atgagctttttgtcttcatcggtcaatgtcaaccctgcgctttaccagctgtatgattcg
aacgatctgcgaaaaactattttttttaatgcaagtgggaaaaattttaagggtaattat
aacaatgtcagcaggttgtttggcggcatagcaaatgatgaaatttatttaatccggtct
gaagcgcagataagaagaaataagttacaggaaggactggacgacttgaatacattgtta
attaatagatataaaactggaacatttttttcttatacagtttctaatacccctgatccg
ctttcactggttttaaatgaacgcagaaaagagcttccctttagaggtcagagatggaca
gatctaaggagattaaatcaggatgcaaaatataaaacgatccttacaagacaggtgaat
ggtatagactacaatattttgccattggataaaaggtacacttatccaattccccagtct
gaaattttgaattccggcatggaacaaaattaa
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