Pedobacter heparinus: Phep_1102
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Entry
Phep_1102 CDS
T00978
Name
(GenBank) type II secretion system protein E
KO
K02652
type IV pilus assembly protein PilB
Organism
phe
Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
phe02044
]
Phep_1102
02035 Bacterial motility proteins [BR:
phe02035
]
Phep_1102
Secretion system [BR:
phe02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Phep_1102
Bacterial motility proteins [BR:
phe02035
]
Pilus system
Pilus assembly proteins
Phep_1102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
AAA_16
ResIII
AAA_29
AAA_22
AAA_14
nSTAND3
AAA_23
ABC_tran
AAA_19
AAA_11
cobW
Rad17
MshEN
AAA_30
Zeta_toxin
AAA_7
CbiA
DEAD
YnfU
AAA
RecA
SRP54
Motif
Other DBs
NCBI-ProteinID:
ACU03320
UniProt:
C6Y3P1
LinkDB
All DBs
Position
1288686..1290119
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AA seq
477 aa
AA seq
DB search
MKEVKQELSVNPALIHELTMEQAWYYRIFPEELLADTLCLYCEEGADVAALTDELEVLLG
RTIVLQTLDPLVMARLLNQYYIREEQQTSIGNLTHDHASDDFLENLIAEAKRLKSSDIHI
ETYEEKCRVRIRIDGMLIERYLLSRLEYPAIINRIKILANLDIAEKRLPQDGRINFKTAQ
HQFDIRVSVLPTLYGEKVVLRLLNNDATNIDLYTLGFAEGDLNNYLEGVKRPNGIVLISG
PTGSGKTTTLYATLKLLNKNTRNILTIEDPIEYTLDGINQVQLKENIGLTFAAALRTFLR
QDPDVIMVGEIRDPETANMAIRAALTGHLVLSTIHTNSAWGTISRLMDMGIPPFLVANTL
NTSVAQRLVRLLCPHCKTQSSMEHSLYPKSFNPPEKVDVHWMAKGCDQCYFTGYKGRKAV
YEVIPLDQELAFQIKAGNQQPEALLKERGIYTIGENAFALFAHGHTSLEEVYPLLYN
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaggttaaacaggaactgagcgtaaaccctgcattgatccatgagctgaccatg
gaacaggcctggtattacaggatttttccggaagaactgctggcggataccttatgcctg
tattgtgaggagggtgcagatgtggccgccttaacagatgagctggaggttttactgggc
agaaccattgttttgcaaacgcttgacccgctggtaatggccaggctgctgaaccagtat
tacatcagggaagagcagcagaccagcatcggcaacctgacgcatgaccatgcttctgat
gatttcctggaaaacctgattgctgaggccaagcgtttaaaaagcagtgacatccatatt
gaaacttacgaagaaaaatgcagggtgcggatccggattgacgggatgttgattgagcgt
tacctgttgagccgcctggaatacccggccatcattaaccggatcaagattctggctaac
ctggacattgcagagaaaagactgccgcaggatggcaggatcaactttaagactgcccag
caccagtttgacatcagggtatcggtgctgcccacgctttatggcgaaaaggtggtgctc
cgcttattgaacaatgatgccaccaatatagacctgtatacccttggctttgctgaaggg
gatctgaacaattacctggaaggggtaaaaaggcccaatggcattgtactgatcagcggg
ccaacaggctctggtaaaaccaccaccctgtatgctacattgaaactgctgaacaagaac
accaggaacatcctgaccattgaagatcccattgaatatacgctggacggcattaaccag
gtacagctgaaagagaacataggcctgacctttgctgcggcactccgcacttttttaagg
caggacccggatgtgatcatggttggggagatccgcgatccggaaacggccaatatggcc
atacgcgctgcattaacgggtcacctggtgctttctaccatccataccaactcggcctgg
ggcaccatatcgcgtttgatggatatgggcattccgccttttttggtggccaataccttg
aatacctcggtagcgcagcgcctggtgcgcctgctttgtccgcattgtaaaacccaaagc
agcatggaacacagcctgtaccctaaaagttttaacccgcccgaaaaggtggatgtgcat
tggatggcaaagggctgcgaccagtgctattttaccggttataaaggccgtaaggcagta
tatgaagtgatcccgctggaccaggagctggccttccagatcaaggcaggcaaccagcag
cctgaggccttattaaaggaacggggaatttataccattggtgaaaatgcttttgcgctg
tttgcccatggccatacctcattagaagaagtttacccgctattgtataattaa
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