Pedobacter heparinus: Phep_1128
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Entry
Phep_1128 CDS
T00978
Name
(GenBank) RagB/SusD domain protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
phe
Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phe02000
]
Phep_1128
Transporters [BR:
phe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Phep_1128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
ACU03346
UniProt:
C6Y3R7
LinkDB
All DBs
Position
1319499..1321205
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AA seq
568 aa
AA seq
DB search
MDIYRQILPVLMRTDNAGSRWRNQLLLETGTENGTSNNPAGGLNVRDFNSGSFTPGSTGM
FWQSDWREYYAGIRACNMYLENVDNIPDDSTIPFTAATRKIRKAEVKWIMAFFYAELAKQ
FGGMPIITRVIDASENLEVARSTFDETIAFIVKLCDEAAVDLPVQPLVDPTPDPDLGRVT
KGAALALKARMLLYAASPLWNDPANPVASNENGKYDENKWQLAAQAAQDVIALNRYSLHP
DISTLFTTRTNNEIIFARMQEPMAYFTATHVPFKLFVNSTPYVIGGNNQVTYNMVKQYEI
LNGGVAYTVDDPPSLSGYNDQDPFKRRDPRFYRDNIYNGAKLRLANTDRVAEFGRVAPGV
AKSPAHNTLESPYDSFVYSVKFCDLTLNITTDARNPSANGKTNQNYPYLRYAEVLLNYAE
AVNEAYGPDVVPPIAGATKTARAALNEVRVRAQYPANTATSKVEYMGYTGGMPPIVGGTD
KVSFRTKLQHERRVEFCYEEHWFWDFRRWKLTPETVIKVQIPVWTSPTTVRYDINTIETR
FWNPKMYRMPIPESEVLANPKMVQNSGW
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggatatttaccgccagatattgcctgtattaatgcggaccgataatgcaggatcacgc
tggagaaatcaattacttttggaaaccgggacagaaaatggtacttccaacaaccctgcc
ggcggcctgaatgttcgcgattttaattcaggttcatttacacccggtagtacaggtatg
ttctggcagtctgactggagagagtattacgcaggtatccgtgcatgcaatatgtatctg
gaaaatgttgacaacatcccagatgattcgacaattccgtttacggcggctacacggaaa
atccgcaaagcggaagttaaatggataatggcctttttttatgcagaacttgccaaacag
tttggtgggatgcccattatcacaagggtgatagatgcttcagagaatctggaggttgca
aggagcacctttgatgaaacgattgcatttattgttaaactctgtgatgaggctgcagtt
gatctccctgtacaaccacttgtggatcctactcctgatcctgacttaggcagagtaact
aaaggcgctgcgctggctttaaaggcacgtatgttattatatgctgccagccctttgtgg
aacgatccggcaaaccctgttgcatcaaatgaaaacggtaaatacgatgaaaataagtgg
cagcttgctgcgcaagctgcacaagatgtaatagctttgaatagatatagccttcatccg
gatatttcaacattgtttactacacgtaccaataatgagattatttttgcccgtatgcaa
gaacccatggcctattttacggccactcatgttccgtttaaattgtttgtaaatagcaca
ccctatgttattggtggaaataaccaggtaacatataatatggtcaaacaatatgaaata
ctcaatggaggtgttgcatatactgttgacgatccgccatcattatccggctataatgat
caggatccgtttaaaagacgggatccgagattttatcgtgacaatatatacaatggggct
aagttaagattagcgaatacggaccgggtagctgaatttggtcgtgtagccccaggggtt
gctaaatctccagctcataatacgctggaaagtccatacgatagctttgtgtatagcgtg
aaattctgcgaccttacgcttaatattaccactgacgcgcgtaatccaagcgcaaatggt
aaaacaaatcagaattatccataccttaggtatgctgaggttttgttgaactatgcagaa
gccgtgaatgaagcatacgggccggacgttgttccacctattgctggggctacaaaaaca
gctagagctgcgttgaatgaagtgcgtgtaagagcacaatatccagcaaatacagctaca
tctaaagtagaatatatggggtatactggcggtatgcctcctattgtaggaggtacagat
aaagtttctttcagaacaaagttacagcacgagcgtcgtgttgaattttgttatgaagaa
cattggttctgggattttcgtcgttggaaacttactccggagacagttattaaagtgcag
ataccggtttggacgtcacccactacggtgagatacgacattaatactatagagacccgc
ttttggaatcctaagatgtatcgtatgccaatacccgaatccgaagtattggcgaaccct
aagatggttcagaattcgggctggtaa
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