Pedobacter heparinus: Phep_1260
Help
Entry
Phep_1260 CDS
T00978
Name
(GenBank) RagB/SusD domain protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
phe
Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phe02000
]
Phep_1260
Transporters [BR:
phe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Phep_1260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD-like_3
SusD_RagB
SusD-like_2
UxaC
Motif
Other DBs
NCBI-ProteinID:
ACU03476
UniProt:
C6XSD1
LinkDB
All DBs
Position
1489675..1491732
Genome browser
AA seq
685 aa
AA seq
DB search
MKNQFIKKAFSACGLGLALLLTTPSCKLDEYNPNALAEEDVLRDFNGFRSFQSNIYTGLW
GSLIGMPYGFLSETGTDLWTSPTNGVSNRQVMRYEEFTNNFNLVTNTWDFAWGSIKDCNK
TIEIAPLIKDGNANDIKTLVAEAKAMRAYYYSVLVVQFGNIPLITTTDDPVKNLNPTRST
VAEIYAQIVADLTAAAQDLPVVPYQGNLQRVTKKGALGLLARVYAQGGGEGLMEGTKSYW
LRAKEVAEDLILNKGAYGATLYTDFAQVFAYANNRNNAEALFTAYGLNPYSPSYDVATSN
SKPNWYLHFYPSLDNAFGAGTDLLKRGVGSNTSNAYYGRLNQSFIAPTKYLINCFNATYD
KRWENSFQTAFANYSGVQAKTTNPTPPSPANVTYADATVTLTAAICTKYGINPAFVGQKI
YPFVDVDAKNASANATWQYPPKVWPKGVTTGAITSLQTVANANVHPYPLDVDEDRFFAYL
SKDPLTPAEKALRKYAVVNINDLFDPADPTGAKYKDPTGNGLTPINMANLFPALSKFNHN
FDGGWLGGNFQQKLGNIMVMRMAEVYLLAAEATLKSGGSGAVAAGYLNELRKRACRNAAD
FNTGTGMQLTNATMNDVFDEYARELCGEFTRWALLKRHRAFEARLAQYNGRAAASFIPAK
HYNRPIPFSFLNTINNGSEFGTNGY
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatcaatttataaagaaagcatttagtgcatgtggtttaggtttagctttacta
ttgaccacaccatcatgtaagttagatgaatacaatcctaatgcgcttgcggaagaggat
gtgctcagggattttaacgggttcagatcgtttcaatctaacatttataccgggctttgg
ggctcattgattggcatgccgtatggatttttatccgaaaccggaaccgatttatggaca
tcgccaaccaatggtgtgagcaacagacaagtgatgcggtatgaggagtttaccaacaat
tttaacctggttaccaatacctgggattttgcatggggctcgatcaaagattgcaataaa
accatagaaattgctccgctgatcaaagatggaaatgccaatgatatcaaaactttagtt
gcagaagcaaaggcgatgcgggcttactattattctgtactggtagtacagtttggtaat
atcccgctgatcacaacaactgatgatcccgtaaaaaatttaaatcctaccagaagtact
gttgccgaaatttatgcccagattgtggcagatttaactgcggcagcacaagatcttcct
gtagtaccttatcagggcaatcttcagcgtgtgaccaaaaaaggagcgctgggtttgctg
gcccgtgtatatgcacaaggagggggagaaggattaatggagggaaccaaaagttactgg
cttagggcaaaagaagttgctgaggatctgattttaaataaaggggcctacggtgctact
ttgtatacagattttgcccaggtatttgcttatgccaacaatagaaataatgcggaagcc
ttatttactgcgtatggcctgaatccttatagtccatcgtatgatgtggcaacatcaaat
tcaaaacccaactggtacctgcacttttatccatcacttgataatgcatttggcgcaggt
acagaccttttaaaaagaggtgtaggttctaatacgtcaaacgcatattatggacgcctg
aaccaatcgtttattgcgcctacaaaatacctgatcaattgttttaatgcgacctatgat
aagcgttgggaaaattcatttcagacagcgtttgcaaactattcgggggtacaggcaaaa
acaactaatccgaccccaccaagtcctgcaaatgtaacctacgctgatgctacagttacg
ctgacagctgccatatgtaccaaatatggtattaatcctgcatttgttggtcaaaagatt
tatccttttgtagatgtagatgctaaaaatgcttctgcgaatgcaacctggcaatatccg
ccaaaagtttggccaaaaggagtaactaccggtgctattacttctttgcaaaccgttgca
aatgccaatgtgcacccctatccgctggatgttgatgaagacaggtttttcgcctattta
agtaaagatccgctaacgccagcagaaaaagcactgcgcaaatatgcagtggtgaatatc
aatgatctttttgatccggcagatccgacaggggctaaatacaaagaccctacaggtaat
ggtttaacgccgataaatatggcaaatcttttcccggctttaagtaagtttaatcataat
tttgatggtggatggctagggggtaactttcagcaaaaactaggtaatattatggtgatg
cgtatggcagaagtttacttgcttgcagctgaggctacgcttaaatctggtggaagcggg
gcagttgctgccggatatttaaatgagttgcgcaaacgtgcatgccgcaatgctgccgac
tttaatacaggtaccggaatgcagttaaccaatgcgacaatgaacgatgtttttgatgaa
tatgcacgtgaattatgtggtgagtttacccgttgggcacttttaaaacgtcatagagca
ttcgaggcgcgcctggcacaatataacggtagggctgcagccagctttattccagcaaag
cattataacaggcctattcctttctctttcctgaataccatcaataatggaagcgaattt
gggaccaatggttactag
DBGET
integrated database retrieval system
