Pedobacter heparinus: Phep_1265
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Entry
Phep_1265 CDS
T00978
Name
(GenBank) ABC transporter related
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
phe
Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
phe03012
]
Phep_1265
Translation factors [BR:
phe03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
Phep_1265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
ABC_tran_CTD
AAA_29
MMR_HSR1
AAA
NACHT
nSTAND_NTPase5
AAA_14
RsgA_GTPase
AAA_28
Dynamin_N
DUF815
DUF5906
GTP_EFTU_D2
TRAF_BIRC3_bd
Adeno_E1B_19K
EpmC
DUF5798
AAA_15
Caskin-tail
Motif
Other DBs
NCBI-ProteinID:
ACU03481
UniProt:
C6XSD6
LinkDB
All DBs
Position
complement(1495827..1497743)
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AA seq
638 aa
AA seq
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MISINDLTFLLGSRALYDEADWHIKPGERIGLIGANGTGKSTLLKIIVGEYAPSSGTISM
SKDLKIGYLNQDLLSYDSHHSILHVAMEAFERQNQLHDEIEALLKKIETDYSEEVLNKLS
DKQQEFEALDGYNIEYRANEILAGLGFSTQDQHRPLNTFSGGWRMRVMLAKILLQTPDIL
LLDEPTNHMDLPSIKWLETYLLSFEGAIVIVSHDRYFLDKVVNKIVESRKGKLTPYAGNY
TFYLEEKALRGEIQKGEFKNQQAKIKQEERLIERFRAKASKAKMAQSRMKALDKLERVED
VDDDNPTVNFQFKFSKPSGRHVVRIENATKSYPNVEILENAEGVIEKGDKIALIGANGKG
KSTLLRIIAGTEKFDGKCETGHNVTTTFFAQHQLESLHLDNTILEELQAFAPKHTDTELR
GILGCFLFTGDDVFKKIRVLSGGEKSRVALAKSLTTDSNFLILDEPTNHLDIQSVNILIQ
ALQQYEGTFIAVSHDRYFLDNVANKIWFIEEKNIKEYPGTYAEYEEWNAKRPQPVATPIP
VKQEKEVKPKAEEKPVSLNAQQQLKKLNDQLQKTEKEITAFEQSVKTIEAKIADEETYSN
ANKLAEANAAYTTAKFLLDTAQNTWEELASQIMELESK
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgatttcaataaacgacttaacattcctgctgggctccagggcattatacgacgaagca
gactggcacattaaaccgggagagagaattggactgattggtgccaatggaacaggaaaa
tctacactattaaaaataattgttggcgaatatgcaccttcttcgggaacgatttctatg
tcgaaagacctcaagatcggctacctcaaccaggatctgctttcttatgattcgcatcat
agcattttacatgtagcaatggaggcttttgaacgccaaaaccagctacatgatgagatt
gaagcacttttaaaaaaaattgagactgattattctgaagaagttttaaataaactgagc
gacaagcaacaggagtttgaagcacttgatggctataacattgaataccgtgccaacgaa
atcctcgcaggtcttggttttagtacccaggatcagcacagacccttgaataccttttcg
gggggttggcggatgcgcgtaatgctggccaagatcctgctgcaaacaccagatatcctg
ttactggatgaacctaccaaccacatggatttaccttccattaagtggctggaaacttat
ttattaagctttgaaggtgccatagttatcgtttcgcacgatagatatttcctggataaa
gtggtcaataaaattgtagagtcacgcaagggtaaactgacaccttatgcaggtaattat
acattttaccttgaagagaaagctttaaggggcgagatccagaaaggtgaatttaaaaac
cagcaggccaaaatcaaacaggaagaacggctgatcgagcgcttcagggctaaagcttcc
aaagctaaaatggcacagtcgcgtatgaaagcactggacaagctggaacgtgtagaggat
gtagacgatgataatcctacagttaacttccagtttaaattttctaaaccttcaggtcgt
catgttgtccgcattgaaaatgccaccaaaagctatcctaacgtagaaattctggaaaat
gctgaaggggtaatcgaaaaaggtgataaaattgccctgatcggcgccaatggtaaggga
aaatctactttattaaggatcattgccggcacagagaaatttgatgggaaatgcgaaacc
ggtcataacgttaccactaccttttttgcacagcaccagctggaatcgctgcacctggac
aataccattttagaagaactgcaggcttttgcacctaaacataccgacacagaactacgt
ggcatattaggctgttttctatttaccggtgatgatgttttcaaaaagatcagggtactt
tccggaggagagaaatcgagggtagcattggcaaaatcactgacgacggattctaacttc
ctgattctggatgagcctaccaaccacctggacatccagtctgtaaatatcctgatccag
gcgctgcagcagtatgaaggtacttttattgccgtttcccacgacaggtacttcctggat
aatgtggccaataagatctggttcatagaagagaagaacattaaagaatatcctggaacc
tatgccgaatatgaagagtggaatgccaaaaggccgcaacctgttgctaccccaatacct
gtaaaacaggaaaaggaagtaaaacctaaagcggaggagaaaccagtttctttaaatgca
cagcagcagcttaaaaaactaaacgaccaactgcaaaaaacagaaaaggaaattactgct
tttgagcaaagtgtaaaaaccatagaagctaaaatagccgacgaggaaacctattcaaat
gcgaataagttagcagaggccaatgcagcatataccacggccaagtttttgctggacacc
gcacaaaatacatgggaagaattggcttcgcagattatggaactggaaagtaaatga
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