Pedobacter heparinus: Phep_1294
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Entry
Phep_1294 CDS
T00978
Name
(GenBank) glycoside hydrolase family 2 TIM barrel
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
phe
Pedobacter heparinus
Pathway
phe00052
Galactose metabolism
phe00511
Other glycan degradation
phe00600
Sphingolipid metabolism
phe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
Phep_1294
09103 Lipid metabolism
00600 Sphingolipid metabolism
Phep_1294
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
Phep_1294
Enzymes [BR:
phe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
Phep_1294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Glyco_hydro_2
DFP
Motif
Other DBs
NCBI-ProteinID:
ACU03509
UniProt:
C6XSG4
LinkDB
All DBs
Position
1533767..1536706
Genome browser
AA seq
979 aa
AA seq
DB search
MMKRALLLSFLFLIQISFSTAQSAYQLTPFTGVDYVRVVVSSAFKTAPDNTFKLLISSPK
DGKVLWQGPVKATTAVNEGNNHLAFTVSNLKPVLWTPHNPFLYNVTLQQYSGKTLKAELK
ERAGFRSFERRKGNLYLNGKPIFLRGIAINPPGRGIPDELETSRAFALDYVKYMKSINVN
IIRIPDEEAWFDVCDELGMMVFGGNYSGKVAAGEKVKDQEKVGDETDGGFPKDHDKGVAW
YENEKLGAIAHHPSLMVYAMTNETPFKGSRADAWEKFLDYAFGKLKKWDETRVYIANAGY
GYGKTGDILDIHRYWGWYYSSPFTFLHIRDHAKIVPYPKKEDMPITFTECVGNYTGPDGR
YNLTPQHKNPSSQLAWTGHERQDLQAQLADEHQSFTLRQATESFRQLRSVNPDLSGVFPF
TILFYNWNTIEKFADMKPKPVTDQVKISYQPVLLSWECWTPNVYAGAEINPVAHISNDDN
DFKDLKNAKLVYQIRDKAYSIVFSDSVNIGDIPYYSTAKKKLSIRLPKDLNSGKYELTGK
IISAGKQVSYNYYKLFIADDNFTKAVVPIESVESSVLLYDKEGKTRKSLAALGLKFNSIG
SFGKLPEKGVLIIGENAADQELAGNATAIRNFINGGGRVVALRQDSLRMINLNQLAIHKL
VNRNVDIDDPVYPVSSKSPRNGYYVNAERPNHPLFAGITRENMRIWSDYTNWDETKAGLP
AIKPVTDGFVLENKEDVANTAILANYSSGLQGIAIAEQFMGNGSLLLCGLDISNRTSVDP
VAARIMLNMVSYAASATGHEQHQLISSPIVWGEYETEKGIVVDAYSGFLVNATPRVPPNY
LGKGIVVTKEGYQLAGGNRSGFNTRPGIQYVANGRRPFGPYVQSFGGQPLPDKDSTEGVG
SFWCRIPQGQNLATSVAWNPAKEPVQLKIKVNDLAEVNKTIPAGAKIAIETPVNAEVVKM
TYSGDRRVVILETAFSKKN
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaagagcccttttacttagttttttatttcttatccagatcagtttttcaact
gcgcagtctgcctatcagcttacaccttttaccggggtagattatgtaagggtagtggta
agcagtgcatttaaaactgctccggacaatacttttaaactgctcatcagctcgcctaaa
gatggtaaggtactttggcaggggcctgttaaggctacaacagctgtaaatgaaggcaat
aaccacctggcctttactgtaagcaatttaaagccggttttatggacaccccataaccct
tttttatataatgttactttgcagcaatacagtggcaaaaccttaaaagctgagttgaaa
gaacgtgcaggtttcagaagttttgagcgtcgcaaaggcaacctgtatctgaacggcaag
cccatctttttgaggggtatagccattaatccaccgggcaggggaattcctgatgaactg
gaaaccagcagggcttttgcgctcgattacgtgaagtatatgaaaagcatcaatgtcaac
atcatccgtatcccggatgaagaagcctggtttgatgtctgcgatgaattgggtatgatg
gtgtttggcggaaactacagcggtaaggtcgcagccggcgaaaaggtgaaagaccaggaa
aaagtgggcgatgaaaccgacggtggttttcctaaagaccatgacaaaggtgtagcctgg
tacgaaaatgaaaaattgggtgccattgcgcaccatccgagtttaatggtgtatgccatg
accaatgaaacaccttttaagggcagcagggctgatgcctgggagaaatttttggattat
gcttttggcaaacttaaaaaatgggatgaaacccgtgtatacattgccaatgccggctat
ggctatggtaaaacaggtgatatcctggacattcaccggtactggggctggtattacagt
tcaccctttacctttttgcacatccgcgaccatgccaaaattgtcccttatcctaaaaag
gaagatatgcccattacgtttacagaatgcgtgggcaattatacagggcccgatggacgg
tacaacctgacccctcagcataaaaacccaagttcgcagctggcctggacagggcatgag
cgacaggatctgcaggcgcagctagccgatgaacaccagagctttactttaaggcaggca
acagagtctttccgacagctccggtctgtaaatccagacctgagcggggtattccctttc
actatccttttttacaactggaataccattgaaaagtttgccgatatgaaacccaagccg
gttaccgatcaggtaaagatcagctatcagccggtattgctgagctgggaatgctggaca
cctaatgtgtatgccggtgcagaaattaaccctgttgcacacatcagcaatgacgacaat
gattttaaagaccttaaaaatgcaaagctggtttaccagatcagggacaaagcctattcc
attgtattttctgatagtgtgaacatcggggatatcccttattacagtacggctaaaaag
aaactcagcatccggcttcctaaagaccttaattctggaaaatatgaattgaccggtaaa
attatctctgcaggcaaacaggtatcctacaattattataagctttttatagccgacgat
aattttacaaaagctgtggtaccaattgagagcgttgagagcagtgtattgctgtatgat
aaagaaggaaagaccaggaaatctttagccgctttgggactgaaatttaacagcatcggt
tcctttggcaaactgcctgaaaagggggtgctgatcatcggcgaaaatgccgccgatcag
gaactggcaggtaatgcaacagccatccggaattttataaatggcgggggcagggtagtt
gctttgcggcaggacagcctgcggatgatcaacttaaaccagctggccatccataaactg
gtaaacaggaatgtagatattgatgatccggtatatcctgtttcctcaaaatcgccccgc
aatgggtattacgttaatgcagaaagaccgaaccatcctttatttgcaggcattacccgt
gaaaacatgcgcatctggtctgattacaccaattgggacgaaacaaaggccgggctgcct
gccatcaagcccgttacggatggttttgttttggagaacaaagaggatgtggcgaatacg
gctatcctggccaattacagttctggtttacagggtattgccattgccgaacagtttatg
ggcaatggaagcctgctgctttgtggcctggacatttcaaaccggacctcagtagatccg
gtagcggcaaggataatgctcaatatggtcagttatgctgcttcggctactggtcatgaa
caacatcagctgatcagtagtccgattgtatggggagagtatgaaacggaaaaagggatc
gtggtggatgcttacagtgggtttctggtaaatgcaaccccgcgtgtaccaccaaattac
ctgggtaaaggtattgtggtgaccaaagaagggtaccagctggcaggcggcaaccgttcg
ggcttcaatacccgtccgggtatacaatatgtggccaacggccgccgtcctttcgggccg
tatgtacaaagctttggcggacagcccctgccagataaagacagtaccgaaggggttggg
agtttctggtgccgcattccgcaagggcagaacctggctacatctgtagcatggaacccg
gccaaagaaccagtacagcttaaaataaaagtgaacgacctggcagaagtgaataaaacc
attccagcaggtgctaaaatagccattgaaacacctgtaaatgctgaggtggtaaagatg
acctattcgggtgaccgccgtgtggttatccttgaaactgcatttagtaaaaagaattaa
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