Pedobacter heparinus: Phep_1301
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Entry
Phep_1301 CDS
T00978
Name
(GenBank) RagB/SusD domain protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
phe
Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phe02000
]
Phep_1301
Transporters [BR:
phe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Phep_1301
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Fibrillarin
Motif
Other DBs
NCBI-ProteinID:
ACU03516
UniProt:
C6XSH1
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All DBs
Position
1548589..1550304
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AA seq
571 aa
AA seq
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MKKKIFLAAIFMVLMAAACKKGGVLEQVKTTDLTEESTFADSARTMQFLTRIYTDIGFSS
DPKRFGSSVGVYSICDEVEGSLLSATAFNVIFQTGAISALNVPTDAWVTTYANIRRVNLL
LSHLQTTPLSQRLRDRIAGEARFLRAWYYFILIKHYGGVPLVGDVVYGATDPVSGKRATY
EECVNYIESECDAAALALPLVQTGLDFGRITKGAALALKSRLLLYAASPLFNGRVDMDGV
LGYPNADPARWSKAAKAALDVISLNQYSLYELAGGLGFQKVFTLRKNSEYILASMAGNNR
TLEAIWDPATRTGSGSAMPYQELVDAFGTINGKAITEDLKSPGNPTGYDPTNPYVNRDPR
FNWSILYNEAPRLNTSKTVTPVFTYAGAAQDGFNFTKTGYYLRKMLDDNTIASSTSSATE
RCFPLIRYAEILLNYAEASNEAGDTQTAYTQLKAIRKRAGILAGPEDDYGLAEGLTKEGM
RTVIQNERRVELAIEEHRYWDVRRWKIAENVSNKTLHGMKITRLGTGTPATYTYELINIR
TPAFVAPKYYLWPIPQGEVNKSAELIQNPGW
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaaaatatttttagctgcaatctttatggttctaatggctgcagcctgtaaa
aaaggaggggtgctggagcaggttaaaaccacagatttaacagaagaaagtacctttgca
gacagtgcccgcactatgcagttcctaaccaggatttatactgatattggctttagttcc
gatcctaaaaggtttggcagcagtgtaggggtatacagcatttgtgatgaggtggaaggc
tcgttgctcagtgctactgcatttaacgtcattttccagactggagcaatcagtgcatta
aatgtgcctactgatgcctgggtaactacatacgccaacattagaagggtaaacttattg
ctgagccatttgcagaccacaccgctatctcagcgtttaagggacaggattgccggtgag
gcccgctttttaagggcctggtattattttatcctgattaaacattacgggggcgtgccg
ctggtaggcgatgtggtttatggcgccactgacccggtttcaggcaagcgtgccacttat
gaagaatgtgtgaattatattgaatcggaatgcgatgctgctgccctggcccttccactc
gtacaaaccgggctcgattttggacgcattaccaaaggtgcagcattggcactaaaatcc
aggttgctgttgtatgctgcaagcccgctgtttaacggccgggtagatatggatggggta
ttgggttatccgaatgccgatcctgcccgatggagcaaggctgcaaaagcagcgctggat
gtgatcagcctgaaccagtacagtctttatgagctggctggcggtctgggctttcagaaa
gtatttaccctgcgcaaaaacagtgaatacatactggcttccatggctggtaataaccgt
acgctggaagccatctgggatccggcgaccaggacagggtcgggcagtgccatgccctac
caggaactggtagatgcttttggtaccatcaatggcaaagcgattacggaggaccttaaa
tcgcctggaaaccctacaggttatgatcccacaaatccttatgtaaaccgcgatccccgt
ttcaactggagcatcctgtacaatgaagccccacggttgaacaccagtaaaaccgttaca
ccggtatttacttacgcaggtgctgcgcaggacggttttaactttaccaaaaccggctat
tatttaagaaaaatgctggacgacaataccattgccagtagcacctcatcggcaacagaa
cgctgctttcctttaatccgctatgccgagatcctgttaaattatgccgaagccagtaat
gaggcaggtgatacacaaaccgcatacacacagctcaaggccattcgcaagcgcgcaggc
atactggctggtccggaagacgattatggactggcggaggggcttactaaagaagggatg
cggacggtgatccagaatgaaagaagggtagagctggctattgaagagcatcgctactgg
gatgtacgcagatggaagattgcagaaaatgtatccaataaaaccctgcacgggatgaaa
atcaccaggctaggtaccggtacacctgcaacctatacttacgaactgatcaatatccgt
acaccggcctttgttgcaccgaaatattacctgtggccaatcccgcagggcgaggtcaat
aaatcagcagagctgatacaaaacccgggctggtaa
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integrated database retrieval system
