Pedobacter heparinus: Phep_1361
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Entry
Phep_1361 CDS
T00978
Name
(GenBank) RagB/SusD domain protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
phe
Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phe02000
]
Phep_1361
Transporters [BR:
phe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Phep_1361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD-like_3
SusD_RagB
SusD-like_2
TPR_MalT
Hypoth_Ymh
Motif
Other DBs
NCBI-ProteinID:
ACU03576
UniProt:
C6XT15
LinkDB
All DBs
Position
complement(1619137..1620417)
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AA seq
426 aa
AA seq
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MNIKIFILLIILSITGLSCQKQLNLYPHSAASSANLSAKDVELFLNGVYSKVQNAPGRES
YIMSDLIGGNLITARGTGGPIQLINSILRPEQAMMSSSWNGYYNALYQVNVLLESASDMD
ASTRKEEILGTAHFFRGYIYYNLVSRWGGVPVLQKNTTANVARNTEAEVWAFIESELNQA
IAQAPNYNNYYYVSKDAAKALMARVKLAQGKMTEAATLAEQLITAGNFKLDTFEKIFRNQ
QNTEEIFAFKNLTAESSIAISTLFYTYAHPVKGSYAYAPASDVMQLFEDGDKRKAMSIDV
YGSDNVINKYPSGQSGTDPIIVTRLAEMYLISAEAQGLSGLGRLNQLRNTRGLPDVNPVG
EAAYINAVLLERRKELLAEGFRWYDLVRLQKAKTELGITDAQFKLPIPEKELVLNNLLVP
NPGYGN
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcaaaatattcattttacttatcatcctgtcaatcacaggcctctcctgtcag
aaacagcttaacctttacccccattcagcggcctcatcagccaatctatcagccaaagat
gttgagcttttcctgaacggagtgtacagtaaggtgcaaaatgcaccgggtcgcgaatct
tatatcatgtcagatctgattgggggcaatctgatcacagcaagaggaaccggaggccca
atccagttaatcaacagtatacttcgcccggaacaagccatgatgagttcctcctggaac
ggttactataatgcactttaccaggtaaatgtattactcgaatctgccagtgatatggat
gcttccaccagaaaagaggaaatattaggcactgctcactttttcagggggtacatttat
tacaatctggtatcccgctggggtggcgtaccagtgctgcaaaaaaatacaactgcaaat
gttgcaagaaatactgaagcagaagtctgggcctttatcgagtcagagcttaaccaggca
attgcccaggccccaaactacaacaattactactatgtatctaaagatgcggcaaaggca
ctaatggcccgggtaaaacttgcacagggaaaaatgacagaggcagcaactcttgcagaa
cagctcattaccgccggcaattttaaactggatacctttgaaaagatcttccgcaaccag
cagaataccgaagagatctttgcctttaaaaacctcactgccgaatccagcattgccatc
agtacccttttttacacctacgcacatcctgttaaaggaagttatgcttacgcacctgca
agtgacgtgatgcaactgtttgaagatggtgataaaagaaaagccatgtctatcgatgta
tatggaagtgataatgtgatcaataaatatccaagtgggcagtcaggaacagaccccatt
attgttaccaggctggcagaaatgtatctgatcagcgcagaagcgcagggtttaagcggt
ttgggccggctaaatcaactgagaaacacccgtggactgccagatgtaaatcccgtaggc
gaggcggcctatatcaatgctgttttgctggagcgcagaaaggaacttctggccgaaggc
ttcaggtggtacgatcttgtacgccttcaaaaagctaaaacagaactgggcattaccgat
gcacagtttaaactgcccatacccgaaaaagaactggtgctaaacaatctgcttgtgcca
aatccaggttatggtaattaa
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